Gene Caci_6156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6156 
Symbol 
ID8337519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7083594 
End bp7084967 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID644959257 
Producthypothetical protein 
Protein accessionYP_003116851 
Protein GI256395287 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.416994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.477374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGCCACGGA CACCTCCGGG CCCGAGGCCG AAGCCCAGAC CCCGGCCGCC 
CGCCCGGTCC CGGTGTCCCG CGTCCTGCGC TTCGAGCTGA CCAAGCAGTT CTCCGCCTGG
CGGGTACGCC TCCTGATCCT GCTGTGCTGG TTCGGCCCGG GGCTGCTGGT CTTCGCCATC
GACCAGCAGA GCACCCTGCC CTCGGACACC CTGTTCGGCC GCTGGATGCA CGCCACCGGC
TGGGCCGGAT CCCTGGTGGC GCTGGGCTTC TGCGGCACGT GGGGACTGCC GCTGATCACC
TCCGTGGTGG CCGGCGACGT CTTCGCCTCC GAGGACCGCC TCGGTACCTG GCGCCACCTG
CTCATCGCCA TCCGCTCGCA CCGCCGCATC TTCGCGGCCA AGGCGGTCGC CAGCCTCACC
GTGATCCTGC TGCTGGTCGC GGGGCTCGCC TTCTCCAGCA TGCTCGGCGG TCTGCTCGCC
GAGGGGAACA ACCCGCTGGT CGGGCTCGAC GGCCACAGCC TGTCCGGCGG CGACGCCGGC
GTCCAGGTCC TGCTCGCCTG GACCGCCGTC CTGGCGCCGA CGCTCGCCCT GGCCGCCATC
GGGCTGCTCG GCTCGATCGC GCTGGGCCGC TCGCCGATGG GCCTGCTGCT GCCGATGATC
GTCGCGCTGG GCATGCAGAC CGCGCAGATG CTGCCGCTGC CGGTCGCCGT CCGGCTCGCG
CTGCCCGGCT ACGCCTTCAT CTCCTGGAAC GGTCTGTTCG CCGACCCCGA GCAGCTCAAG
CCGCTGCTGA TCGGCATCGT CGTCAGCGTG GTGTGGGCCG TGGCCGCGAC CGTGCTGGCC
TATCTGCTCT TCCTGCGCCG GGACTTCACC AACCTGACCA ACGACGGCGC CGGACGCAGG
GTCCTGACGA TCGGCGTCCT GCCGCTGGCC GCCGTCCTGG CCGCGAGCGT CGGCGTGGTG
GCGGCCGTGA CGCCCGGCGC CGGCGGATCG GGCATCGACC AGAACAAGAT CCAGCAGTCG
GTCGCCACCG CCTTCGCGCA CCTCTACCGG CTGCAGGAGC AGCAGATGCG CCGTCCGCCG
CTCACCGAGG CACAGCTGCA CAGCGCCGCC ACCTGCCTCA AGAGCGAAGG GCTCGGCAAG
CAGGAGGGTC CGGGGACCGA CTGGCGCTGC ACGGTCTCCT GGAGCGTCCC GGGCGACAAC
ATCACCGCTC AGGCCGTCTA CCAGCTCGAC GTCACCGCCA ACGGCCGCTA CATCGCCGAC
GGCGACGGAC CGCAGGAGGT CAACGGCTAC TTCCTGATCG TCACCGGCGG CAAGACCGTG
TCGAACCCGC TGTGGCAGTT CGACGGCAAC GTCGATCTGG TCTCCGCGCA CTGA
 
Protein sequence
MTATATDTSG PEAEAQTPAA RPVPVSRVLR FELTKQFSAW RVRLLILLCW FGPGLLVFAI 
DQQSTLPSDT LFGRWMHATG WAGSLVALGF CGTWGLPLIT SVVAGDVFAS EDRLGTWRHL
LIAIRSHRRI FAAKAVASLT VILLLVAGLA FSSMLGGLLA EGNNPLVGLD GHSLSGGDAG
VQVLLAWTAV LAPTLALAAI GLLGSIALGR SPMGLLLPMI VALGMQTAQM LPLPVAVRLA
LPGYAFISWN GLFADPEQLK PLLIGIVVSV VWAVAATVLA YLLFLRRDFT NLTNDGAGRR
VLTIGVLPLA AVLAASVGVV AAVTPGAGGS GIDQNKIQQS VATAFAHLYR LQEQQMRRPP
LTEAQLHSAA TCLKSEGLGK QEGPGTDWRC TVSWSVPGDN ITAQAVYQLD VTANGRYIAD
GDGPQEVNGY FLIVTGGKTV SNPLWQFDGN VDLVSAH