Gene Caci_6143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6143 
Symbol 
ID8337506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7070416 
End bp7070946 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID644959244 
Productorotate phosphoribosyltransferase 
Protein accessionYP_003116838 
Protein GI256395274 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.360288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0393494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACT CCGACCTCGC AGCCCGCATC CACGCCGCCG CGCACCTGAC CGGCACGTTC 
ACCCTTCGCT CGGGCCGCAG TGCCAGCGAG TACTTCGACA AGTACCGCTT CGAGGCCGAT
CCGGTCCTGC TCGACGAGGT GGCCGCGCGC ATGGTTCCGC TCGTGCCGTC CGACACCGAA
GTGCTCGCCG GGTTGGAGAT GGGCGGTATC CCGGTCGTCA CCGCCCTGGG GCGGCACACC
GGCTTGCCCT GTGCCTTCGT GCGCAAGACC GCCAAGGCCT ATGGCACGCG CCGTCTTGCC
GAGGGGGCGG AGATCGCGGG ACGTCGAGTC CTGATCATCG AGGACGTGGT CACCAGTGGC
GGGCAGATCG TGCTGTCCGC CGAGGAGTTG CGCACGCTCG GCGCCGACGT GCATGAGGCG
CTGTGCGTCA TTGATCGGGA GCAGGGCGGC GGCGAAGCCT TGGCCGCACA AGGGATTCAG
CTCTCGTCTC TACTAACTGC CGACGATCTG CGCTCGGCGG CGGCACGCTA G
 
Protein sequence
MTHSDLAARI HAAAHLTGTF TLRSGRSASE YFDKYRFEAD PVLLDEVAAR MVPLVPSDTE 
VLAGLEMGGI PVVTALGRHT GLPCAFVRKT AKAYGTRRLA EGAEIAGRRV LIIEDVVTSG
GQIVLSAEEL RTLGADVHEA LCVIDREQGG GEALAAQGIQ LSSLLTADDL RSAAAR