| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6132 |
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| Symbol | |
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| ID | 8337495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7058208 |
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| End bp | 7059803 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959233 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003116827 |
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| Protein GI | 256395263 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00158878 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCGTCC CCGGGGAGCA GCAGCACCCA CCGACCGACG CCGAGCTGAT CGCCATGGTG
CGGGCCGGCG ACCGGCGCGC GTACGGGCCG CTGTACGAGC GGCACCGACG CGCGGCGCTG
CGCGTGGCGC GCCATCTGGC GCGGGACGAG GCCGCCGCGG ACGACCTGGC CGCCGAGGCG
TTCACCCGGG TGCTGGCGGC GATCGACCGC GGGAACGGAC CGGACGAGGC GTTCCGCGCC
TACCTCTACA CGACGCTGCG GCGCACGGCC TTCGACTGGG CCGAGTCGGA AAAACGCCTG
CGGCTGGTGG AGAACATCGC CGAGCTGGAG GTGACGGCGG CGCCGGTGAC CGGCGCGGAC
CGGGACCCGC TGGACGAGGC CTTCGACCGC CAGATCACCT CCCGCGCCTT CCACTCGCTG
CCGGAGCGCT GGCAGATCGT GCTGTGGCAT CTGGAGGTCG AGGGCGAGTC GCCGGTGGAG
GTGGCGCCGC TGTTGAACCT GTCGCCGTCG GCGGTCTCGG CGCTGGCGTA CCGGGCCCGC
GAGGGCTTAC GCCAGGCGTT CCTCCAGGAG CACTTAGCCG AGACCGTGAA CGACCGCTGC
CGGCCGTTCG CGCAGCGGCT GGCGGCGTTC GTCCGCGGCA AGCTCGGGAC GCGCGACACG
GCGAAGGTCG AGCGCCACCT GGATACGTGT GCTGATTGCA CAGGGCTCTA CCTGGAACTG
CTGAAGTTCA ACGAGTCCCT GCCGGAGGTC CTCTCGCCTC TAGTATTCGG ATCCGCCGCC
GCGGCGAAGA TCATCGCCGG GGTGGCGGTG GGCGCCGCGG CCGGCGCCGG TCTGATGGCG
ACGTCGGCGG GCACCACCGC GACGGTCGTC GGCGGCGGCA CCGCGGCGGG TGCTGCGGCC
GACGGGACGG CGAAGGCCGG CGCACTGCTC GCGCGCTGGC TGATGCAGCT GCGCAAGGCA
CGGACCCAGG CGATCACGAT GGCGGCGGTC GCGGTGGTGG CGTGCGCGAT CCTGGCGTGG
GGCATGTCGG GCGGGACGGG AGCGCCGCCG CTGGAAACGC CGCCGTCCAG CGCACCGGCG
GTCGCGCTGC CCGCGCCGAC GCGCGTCGCC AGCACCAAGC CGACACCGAA GCCCGCACCG
CCGGCTCCGA AGCCCACGAA CCCGCCCGTA GTGAAGCCGA CGCCGGTGCG CTACAGCTCG
ATCGTGAAGC CGCCCGCGCC CCGGCCGCGT CCCACGCCGC CCAAGCCGAA GCCGACACCG
GCGCCGACGC CCACACCGGT CCCGAGCCCG ACCCAGCCGG CACGGACGCC GACCACGCCG
CCCCCTCCGC CGCCGTCGAG CTCACCGACG CCCACACCCC CGGCGCCGAC GCACTCCACC
GAGGAGCCGA CGATCTGCGA ACTGGCGTGG CAGGCGATAA AGGATCCGAC GCCGGAGAAC
ATCGGGCTGA TCCTCGCGGC GCGGTGGGAC CCGTTCTGCG TGCCGGTGCC GTGGGTGCCC
TGGCTGCAAT GGCCGCCGGC GCACGGCACG CATCAGGTCG GACAACACGG CGCGCACACC
GAACGAAGCG AGAAGGTGCA CTACGCGGAT TGGTAG
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| Protein sequence | MPVPGEQQHP PTDAELIAMV RAGDRRAYGP LYERHRRAAL RVARHLARDE AAADDLAAEA
FTRVLAAIDR GNGPDEAFRA YLYTTLRRTA FDWAESEKRL RLVENIAELE VTAAPVTGAD
RDPLDEAFDR QITSRAFHSL PERWQIVLWH LEVEGESPVE VAPLLNLSPS AVSALAYRAR
EGLRQAFLQE HLAETVNDRC RPFAQRLAAF VRGKLGTRDT AKVERHLDTC ADCTGLYLEL
LKFNESLPEV LSPLVFGSAA AAKIIAGVAV GAAAGAGLMA TSAGTTATVV GGGTAAGAAA
DGTAKAGALL ARWLMQLRKA RTQAITMAAV AVVACAILAW GMSGGTGAPP LETPPSSAPA
VALPAPTRVA STKPTPKPAP PAPKPTNPPV VKPTPVRYSS IVKPPAPRPR PTPPKPKPTP
APTPTPVPSP TQPARTPTTP PPPPPSSSPT PTPPAPTHST EEPTICELAW QAIKDPTPEN
IGLILAARWD PFCVPVPWVP WLQWPPAHGT HQVGQHGAHT ERSEKVHYAD W
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