Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6127 |
Symbol | |
ID | 8337490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7052426 |
End bp | 7053370 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959228 |
Product | cobalamin biosynthesis protein CobD |
Protein accession | YP_003116822 |
Protein GI | 256395258 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00302618 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00095084 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATCTT CGGCGCGGGT GGTGGGGTTG GCGGTGGGGT TTGTGGCTGA TTGGTGCTTT GGGGATCCGG GGCGGGGGCA TCCGGTGGCG GGGTTTGGGC GGGTGGCTTC GGGGGTGCGG GGGGTTTTGT ATGCGGATTC GCGGGGTGCG GGGGTGGCTT ATGCCGGGGT GCTTGTTGCG GGGGCGGGGG TGGTGGGGGT TGCGGCTGAG TGGGTCGGGC GGGGGCGGCC GGTGGTTGGT GCTGCTTTGA CTGCTGCGGC TACGTGGACT GTGCTGGGTG GGACTTCGTT GCGGCGTGAG GCTTCTGCTA TCGGGGAGTC GTTGGGTGGC GGTGATCTTG CGGCGGCGAG GGAGCGGTTG CCGCATCTGT GTGGGCGGGA TCCGCGGGGG TTGGATGCCG ATCAGATTGC GCGGGCGGTG GTGGAGTCGG TGGCTGAGAA CACCTCTGAT GCCGTGGTGG CGCCGTTGTT CTGGGGTGCG GTGGCGGGGA TTCCGGGGCT GCTGGCGTAT CGGGCGTCCA ACACGCTGGA TGCGATGGTC GGCTACCGCA ATGCCAAGTA CCGGAACTTC GGGTGGGCCT CGGCGCGCCT CGATGATGTC CTCAACTGGG TTCCCGCACG CTTCACCGGT GTCGTCACCG TAGCTGCGGC GCCGGTTGTC GGCGGCAGCC CGGTGCGGGC GCTCAGGGTT CTGCGACGTG ATGGCGCCCG GCATCCAAGT CCGAATGCGG GACGCTGCGA AGCCTCCGCC GCCGGTGCCC TGGGCGTGCG CCTCGGCGGT ACCAACACCT ATGGCGACGC CGTCGAGCAT CGTCCTGTCA TGGGGACCGG TCGTGCGCCG CGCGTGGCGG ACATTCGTCG GGCCGCGGTG TTGTCGGCGA CGGTCGGGCT CGCCTCGGCG GTCGCGGCCG CACGCTTGGC GGGAGCCCTC GCGCGATCAC GGTAG
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Protein sequence | MRSSARVVGL AVGFVADWCF GDPGRGHPVA GFGRVASGVR GVLYADSRGA GVAYAGVLVA GAGVVGVAAE WVGRGRPVVG AALTAAATWT VLGGTSLRRE ASAIGESLGG GDLAAARERL PHLCGRDPRG LDADQIARAV VESVAENTSD AVVAPLFWGA VAGIPGLLAY RASNTLDAMV GYRNAKYRNF GWASARLDDV LNWVPARFTG VVTVAAAPVV GGSPVRALRV LRRDGARHPS PNAGRCEASA AGALGVRLGG TNTYGDAVEH RPVMGTGRAP RVADIRRAAV LSATVGLASA VAAARLAGAL ARSR
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