Gene Caci_6127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6127 
Symbol 
ID8337490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7052426 
End bp7053370 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content70% 
IMG OID644959228 
Productcobalamin biosynthesis protein CobD 
Protein accessionYP_003116822 
Protein GI256395258 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00302618 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00095084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATCTT CGGCGCGGGT GGTGGGGTTG GCGGTGGGGT TTGTGGCTGA TTGGTGCTTT 
GGGGATCCGG GGCGGGGGCA TCCGGTGGCG GGGTTTGGGC GGGTGGCTTC GGGGGTGCGG
GGGGTTTTGT ATGCGGATTC GCGGGGTGCG GGGGTGGCTT ATGCCGGGGT GCTTGTTGCG
GGGGCGGGGG TGGTGGGGGT TGCGGCTGAG TGGGTCGGGC GGGGGCGGCC GGTGGTTGGT
GCTGCTTTGA CTGCTGCGGC TACGTGGACT GTGCTGGGTG GGACTTCGTT GCGGCGTGAG
GCTTCTGCTA TCGGGGAGTC GTTGGGTGGC GGTGATCTTG CGGCGGCGAG GGAGCGGTTG
CCGCATCTGT GTGGGCGGGA TCCGCGGGGG TTGGATGCCG ATCAGATTGC GCGGGCGGTG
GTGGAGTCGG TGGCTGAGAA CACCTCTGAT GCCGTGGTGG CGCCGTTGTT CTGGGGTGCG
GTGGCGGGGA TTCCGGGGCT GCTGGCGTAT CGGGCGTCCA ACACGCTGGA TGCGATGGTC
GGCTACCGCA ATGCCAAGTA CCGGAACTTC GGGTGGGCCT CGGCGCGCCT CGATGATGTC
CTCAACTGGG TTCCCGCACG CTTCACCGGT GTCGTCACCG TAGCTGCGGC GCCGGTTGTC
GGCGGCAGCC CGGTGCGGGC GCTCAGGGTT CTGCGACGTG ATGGCGCCCG GCATCCAAGT
CCGAATGCGG GACGCTGCGA AGCCTCCGCC GCCGGTGCCC TGGGCGTGCG CCTCGGCGGT
ACCAACACCT ATGGCGACGC CGTCGAGCAT CGTCCTGTCA TGGGGACCGG TCGTGCGCCG
CGCGTGGCGG ACATTCGTCG GGCCGCGGTG TTGTCGGCGA CGGTCGGGCT CGCCTCGGCG
GTCGCGGCCG CACGCTTGGC GGGAGCCCTC GCGCGATCAC GGTAG
 
Protein sequence
MRSSARVVGL AVGFVADWCF GDPGRGHPVA GFGRVASGVR GVLYADSRGA GVAYAGVLVA 
GAGVVGVAAE WVGRGRPVVG AALTAAATWT VLGGTSLRRE ASAIGESLGG GDLAAARERL
PHLCGRDPRG LDADQIARAV VESVAENTSD AVVAPLFWGA VAGIPGLLAY RASNTLDAMV
GYRNAKYRNF GWASARLDDV LNWVPARFTG VVTVAAAPVV GGSPVRALRV LRRDGARHPS
PNAGRCEASA AGALGVRLGG TNTYGDAVEH RPVMGTGRAP RVADIRRAAV LSATVGLASA
VAAARLAGAL ARSR