Gene Caci_6125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6125 
Symbol 
ID8337488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7047502 
End bp7048293 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644959226 
ProductrRNA (adenine-N(6)-)-methyltransferase 
Protein accessionYP_003116820 
Protein GI256395256 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.426538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00598372 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCGCC ACAAGACTTC CCCTTACGTG TCCGAATTCC CTGGCGGGCG CCAGGAACTC 
GGGCAGAACT TCCTTGCCGA TCCGGCGCTG ATCGCCGAAA TCCAGCGGCT GGTCCGCGAG
CAGACGCAGG GTCCGATCAT CGAACTCGGC GCCGGCGACG GCGCGCTGAC CGGACCGCTC
TCCCGGCTGA ATCGGCCGGT CACGGCATTG GAGATCGATC CGCGTCGGGT GCGGCGGCTT
CAGGAGCGGT TCGGCGGTCG GGCGGATGTG GTGCGTGCCG ACGTGCTGCG CTACCGGTTT
CCGGCCGCGG AGCACACGAT CGTCGGCAAT ATCCCGTTCC ACCTGACGAC CGCGATCATT
AGGAAGCTGC TATCCGAGCG CGGATGGAGC AGCGCCGTGC TGATCGTGCA GTGGGAGGTG
GCGCGGCGGC GGGCCGGGGT CGGCGGTGCC AGCATGCTGA CAGCCTCGTG GTGGCCCTGG
TACGACTTCG GTCTGGTCCG CCGGATCCCG GCGTCCGCGT TCCGGCCGGT GCCGTCGGTG
GACGCCGGGC TGCTCACGAT GTGGCGCCGT CCCGTGCCGC TGGTCGAGGA GCGAAGCGGG
TATCAGACCT TTGTGAAGCA AGTCTTCCAG GCGCCGGGGC GCGGGGTGGA GGAGATGATC
GCGCGCACGG GTCGGGTGCG GCGTGCCGAG TTGCGGGAGT GGGTCCGCTG GAGCCGGATT
CCGGTCCGGG CTCTGCCCAA GGACTTGGCG GCCGAGGACT GGGCCCGGTT GTGGGAGTTG
GTGCGCGACT GA
 
Protein sequence
MQRHKTSPYV SEFPGGRQEL GQNFLADPAL IAEIQRLVRE QTQGPIIELG AGDGALTGPL 
SRLNRPVTAL EIDPRRVRRL QERFGGRADV VRADVLRYRF PAAEHTIVGN IPFHLTTAII
RKLLSERGWS SAVLIVQWEV ARRRAGVGGA SMLTASWWPW YDFGLVRRIP ASAFRPVPSV
DAGLLTMWRR PVPLVEERSG YQTFVKQVFQ APGRGVEEMI ARTGRVRRAE LREWVRWSRI
PVRALPKDLA AEDWARLWEL VRD