Gene Caci_6121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6121 
Symbol 
ID8337484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7043743 
End bp7044351 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID644959222 
Producthypothetical protein 
Protein accessionYP_003116816 
Protein GI256395252 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03086] conserved hypothetical protein TIGR03086 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.18336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0364143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TCAGGGACCT GAACGCTCGT GCGGTGCGCG ACAGTATGGA TGTTGTCAGG 
CAGGTGCAGG TCACGGACTT GGGGCGGCCT ACGCCGTGTG AGGGGTGGAC GCTGGCGGAT
CTGCTGGGGC ACATGGCGGT GCAGCATCGG GGGTTCGCGG CGGCGGCTCG GGGTGATGGC
GCTGAGATGA GGCACTGGGA GTTCGTGAGT GCGGGGGCGG ATGCCGTGCA GCAGTATCTT
GCGGCGTCGG AGGATGTGCT CGCGGCCTAT GCGGAGCTCG GCGATGATTT GGAGGGCGCC
GTCTTCGAGT TGCCGGAGTT CAGTGTCGAT CCGCCGCGGT TCCCGGCGCG GTTGGGCATC
GGGTTCCACT TCATCGATTA CGTCGTGCAC GCCTGGGATG TGGCCGTCAC GATCGGCATC
GACTTCGAGC TGCGGCCGGA GTTGGAGCAG GACGCGCTGC GCATCACGCT CGCCGTGCCG
AACGGCGACA ACCGGACCGC GGACGGCTCG GCCTTCGTCT CCGCGTTGGA GATTCCCGAG
GACGCCTCGA CGCTCGACAA GATCCTGCTC TACCTCGGCC GGACGCCCGG CTGGCGCCCG
ACCGCGTAG
 
Protein sequence
MTDIRDLNAR AVRDSMDVVR QVQVTDLGRP TPCEGWTLAD LLGHMAVQHR GFAAAARGDG 
AEMRHWEFVS AGADAVQQYL AASEDVLAAY AELGDDLEGA VFELPEFSVD PPRFPARLGI
GFHFIDYVVH AWDVAVTIGI DFELRPELEQ DALRITLAVP NGDNRTADGS AFVSALEIPE
DASTLDKILL YLGRTPGWRP TA