| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6119 |
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| Symbol | |
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| ID | 8337482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7041620 |
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| End bp | 7043104 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959221 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003116815 |
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| Protein GI | 256395251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.665785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0514011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT TCGCCGCTTC CGGTCCTGTG GAGTTCGATG GTGCTGTTGT CACCGTTGTG
GGGGCGCGGG TGGTGGGGTT GTCGGCTTCG GCGGCTTTGC TGGCGCGGGG GGCGCGGGTG
ACGTTGATCG ACCGGTATGA CGATGCGGCG ACGGCTGGTC GGGCGGCGGG GGCTGCCGCG
CAGGGGGCGG TGGTGCGGCT GGGGGATGAT GCGACGCTGC CGGAGGGGAC CGAGCTGCTG
GTGGTGACGC CGGGGTTGCC GCCTTCGGCG CCGATTGTGG CTGCTGCTCG GGCTGCCGGG
GTGCCGATTT GGGGGGATGC GGAGCTGGCG TGGCGGTTGC GGGCTCCGTT GGCCGATGGG
AGTTACGCGC CGTGGCTGGT GGTGACCGGG ACCAATGGCA AGAGCACGAC GGTGCGGATG
GCCGAGGCGA TGCTCAAGCA GGCGGGCAAG GGGGTCGCGG CGTGCGGGAA CATCGGGTAT
CCGGTTCTTG ACGCGGTGCT GCGGGGGCAG GCCGGCGGGG AGGCCGGGGA GCCGTTCGAG
GTGCTGGTCA TCGAGCTGTC CAGCTACCAG CTGTACTGGA GCTCGACGCT GAGCCCGCTG
GCCTCGGCGG TGCTCAACAT CGCGCCGGAC CACATCGACT GGCACGGCTC CTACGCCGAC
TACGTTGCCG CCAAGGGCCG CGCCTATGAG AACTGCCAGG TCGCCGCCGT GTACAACGCC
GCCGATCTGG AGACGGTGCG CCTGGTGGAG GAGGCGGACG TCGTCGAGGG CTGCCGCGCC
ATCGGCTTCA CGCTCGGCGC GCCCGGACTG TCGATGCTCG GCGTGGTGGA CGGCATCCTG
GCCGACCGCG CCTTCATCGC CGACCGCCGC ACCAACGCCG CGGAGCTCGG CACCGTCTAC
GACGTCGAGC CGAACGCCCC GCACAACATC GCCAACGCCC TGGCCGCCGC CGCCTTGGTC
CGCGCTTACG GCGTGGAGCC CGCGGCGGTG CGCGACGGGC TGCGCGAGTT CCGGCCCGAA
CCGCACCGCA TCGCCTGGGT GGCGACGATC GACGGCGTGG ACTTCGTCGA CGACTCCAAG
GCCACCAACC CGCACGCCGC CTCGGCCTCG ATCGGCGCCT ACGACCACGT GGTCTGGCTC
GCCGGCGGCC TGGCCAAGGG CGCCGACTTC GACGACCTCG TGGAGCGGCA CGCCAAGCGC
CTGCGCGGCG CGGTCCTGTT CGGCGCCGAA CGCCACCTGG TCGCCGAGGC ACTGCGCCGC
CGCGCACCGG AGGTCCCGGT GGTGGACCTC GGCGGACCGG GACCGGAGCA GGCCGCCGAG
GTGATCGCCG AGGCGATCGC GGCGGCGCGG ACGATGGCGG TGTCCGGGGA CACGGTGCTG
CTGGCGCCGG CGTGCGCGTC GATGGACATG TTCACCTCGT ACGGACAGCG CGGCGATGTG
TTCGCCGAGG CTGTGAAGGC TGCGAAGGCA GAGGCGACGG ACTAA
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| Protein sequence | MNQFAASGPV EFDGAVVTVV GARVVGLSAS AALLARGARV TLIDRYDDAA TAGRAAGAAA
QGAVVRLGDD ATLPEGTELL VVTPGLPPSA PIVAAARAAG VPIWGDAELA WRLRAPLADG
SYAPWLVVTG TNGKSTTVRM AEAMLKQAGK GVAACGNIGY PVLDAVLRGQ AGGEAGEPFE
VLVIELSSYQ LYWSSTLSPL ASAVLNIAPD HIDWHGSYAD YVAAKGRAYE NCQVAAVYNA
ADLETVRLVE EADVVEGCRA IGFTLGAPGL SMLGVVDGIL ADRAFIADRR TNAAELGTVY
DVEPNAPHNI ANALAAAALV RAYGVEPAAV RDGLREFRPE PHRIAWVATI DGVDFVDDSK
ATNPHAASAS IGAYDHVVWL AGGLAKGADF DDLVERHAKR LRGAVLFGAE RHLVAEALRR
RAPEVPVVDL GGPGPEQAAE VIAEAIAAAR TMAVSGDTVL LAPACASMDM FTSYGQRGDV
FAEAVKAAKA EATD
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