| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6116 |
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| Symbol | |
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| ID | 8337479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7038835 |
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| End bp | 7039827 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959218 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003116812 |
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| Protein GI | 256395248 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.51682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0433001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC AGCAGCGCAG TCCGTACCTC CTCCTCGCGG TGACCATGTT GTTGTGGGGC
GGCGCGTTCT CCAGCTCGGA GACGGTGGTC GACCACGTCC CGCACACCGT CGCCGCCACC
CTGCGCTTCG GCGGCGGCGC GATCGCGCTG CTGATCGCGA GGGCGTTGAC CGGACGGCGC
GGGGTGCCGC GACCCAAGGT CGGGATGCGG GCTTCGGTGC GCGCGTGCCT GGCCGGGGTG
CTGGGAGTCT TCGCCTACAA CGGTTTCTTC TTCTGGGGAC TCTCGCTCGC GCCCTCGTTG
GACGGCGGGA TCCTGATCCC GGTCATGAGT CCGGTGTTGA CCACCTCGTT CCTGCTGATC
AGCGGACGCG AGAAGGCCTC GCGCCGTCGC CTGATCGGTC TCGCGCTCGG CCTCGGCGGC
GCCGCGGCGT ACCTGATCGG GGCGAACAGC GCCGGCGGCG GGTCGCACCG CCTGCTCGGG
GACCTGCTGT ACGTGCTCAG CGCGGTCTGC TGGGCGGCGT TCACCCTCGC CGCTCCGAAG
GTGCTGGCCG GCATCGAGCC GCTGACCGCG ATGGCGTACG CGACCTGCAC CGGCGCCGTC
CTGCTGGCGC TGGTCGCCGC GCCGGACATG GGGAGCGTGC AGTGGGGCGC GCTGCCCTCA
GAGGTCTGGC TCAACGTCGC CTACCTGGCG ATCGGCGCCA CGGCGGTCGC GAACGTCCTG
TACTACCGCG GGGTCGCCGC GGTCGGACCG GCCAGCGCGT CGCTGATGAT GTTCCTCGTG
CCGGCGGTGA ACACGGCGTG CGCCACGCTG TTCCTCGGCG AGTCGTTCAC TCCGGTGCAG
GCCGGCGGCG CGGTGGTGCT GCTGGTCGGT GCGGCGCTCG CGGGGCGGGC GCGGATCAGC
GTGCGGTCGT GGCGCTCGTG GCGCTCGTGG CGGCATCCAG CGGCGCGCGT TCGGCCGGCA
CTTCGGCGGA GGCGCCAGAC GACAGCGGGC TGA
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| Protein sequence | MSAQQRSPYL LLAVTMLLWG GAFSSSETVV DHVPHTVAAT LRFGGGAIAL LIARALTGRR
GVPRPKVGMR ASVRACLAGV LGVFAYNGFF FWGLSLAPSL DGGILIPVMS PVLTTSFLLI
SGREKASRRR LIGLALGLGG AAAYLIGANS AGGGSHRLLG DLLYVLSAVC WAAFTLAAPK
VLAGIEPLTA MAYATCTGAV LLALVAAPDM GSVQWGALPS EVWLNVAYLA IGATAVANVL
YYRGVAAVGP ASASLMMFLV PAVNTACATL FLGESFTPVQ AGGAVVLLVG AALAGRARIS
VRSWRSWRSW RHPAARVRPA LRRRRQTTAG
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