Gene Caci_6111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6111 
Symbol 
ID8337474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7031518 
End bp7032789 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content72% 
IMG OID644959213 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003116807 
Protein GI256395243 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0242933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAA CAACTCCTCA CCGCCTGATC GGCGTCCTGG GCGCCGCGGC GCTGGCCGTC 
GGCATGGTCG CGGCGATGGC GCCGGCGAAC GCCGCTACCG CTGCCAAGAG CCACCCGAGC
AACGTCAAGA ACGTCTGCGG CGCGGCGAAG CCCGGCTTCG ACCGGTGCTA CGCGGAGATC
CGTACCGACG TGCACGAGCC CGCGCACATC AGCCGCGTCG CCGGCACTGC TGGTAAGGCT
GCGGCTGCCG CCACCGCTCC GGCCGGCTTC GGTCCGGCGG ACCTGCACGC CGCCTACAAC
CTGCCGACCA CGGGCGGGGC GAATCAGACG GTTGCGATCG TCGACGCCGG AGACGACCCG
ACGGCCGAGG CGGACCTCGC GGTCTACCGC TCCACCTACG GCCTGCCGGC GTGCACCACC
GCCAACGGCT GCTTCACCAA GGTGAACCAG CGCGGCACGG CCAGCCCGCT GCCGTCCGAC
ATCGGCTGGG GCGTGGAGGA AGCGCTCGAC CTGGACATGG TGTCGGCGGC GTGCCCGCAG
TGCAAGATCC TGCTGGTGGA AGGCGACGAC GCCGACAGCG ACGACCTCGG CGCGTCGGTC
GACACCGCGG TGCGCCTCGG CGCCACCGAG GTGTCGAACA GCTACGGGGG CACCGAGTCC
AGCGCGACGC CCGGCGACGC GGCGCACTAC ACGCACCCCG GCACCGCGAT CGTCGCCTCC
TCCGGCGACA GCGGCTACGG CATCCCGAGC GAGCCGGCCG TGTTCGCCAG CGTCGTCTCG
GTCGGCGGCA CGTCGCTGAC CAAGGACTCC AGCTCTCGGG GCTGGAGCGA GTCGGCGTGG
AGCAGCGACG GCGGCGCCGC CGGCAGCGGC TGCTCGGCCT GGGTCGACAA GCCCGCGTGG
CAGACCGACG CCAACTGCCC CGGCCGCATG GTCTCCGACG TCTCCGCCGA CGCCGACCCG
AACACCGGCC CGGCGATCTA CGTCACCGAC ACCCCCGACC TCGAGGGCCT GCCCTCCGGC
TGGAACATCG TCGGCGGCAC CAGCGCCTCC TCGCCGTTCA TCGCTGGCGT GATCGCATTG
GCGGGCAATC CCGGCAAGTA CAACAACGCC TCCGCCTTCT ACGCGCCGGC GGCGAAGGCA
GGGCTGAACG ACCCGGTCGG CGGCTCGACC GGTCTGTGGG TGGACTGCGG CGGCGACTAC
CAGTGCACCG GGGTCGCCGG TTACGACGGC CCGACCGGGA TGGGATCGCC GAACGGGCTG
TCCGCGTTCT GA
 
Protein sequence
MSRTTPHRLI GVLGAAALAV GMVAAMAPAN AATAAKSHPS NVKNVCGAAK PGFDRCYAEI 
RTDVHEPAHI SRVAGTAGKA AAAATAPAGF GPADLHAAYN LPTTGGANQT VAIVDAGDDP
TAEADLAVYR STYGLPACTT ANGCFTKVNQ RGTASPLPSD IGWGVEEALD LDMVSAACPQ
CKILLVEGDD ADSDDLGASV DTAVRLGATE VSNSYGGTES SATPGDAAHY THPGTAIVAS
SGDSGYGIPS EPAVFASVVS VGGTSLTKDS SSRGWSESAW SSDGGAAGSG CSAWVDKPAW
QTDANCPGRM VSDVSADADP NTGPAIYVTD TPDLEGLPSG WNIVGGTSAS SPFIAGVIAL
AGNPGKYNNA SAFYAPAAKA GLNDPVGGST GLWVDCGGDY QCTGVAGYDG PTGMGSPNGL
SAF