Gene Caci_6103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6103 
Symbol 
ID8337466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7022268 
End bp7023017 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content74% 
IMG OID644959205 
Productprotein of unknown function DUF152 
Protein accessionYP_003116799 
Protein GI256395235 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.088522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.080286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATAT GGCAGCACAC CGGTCCCGAC GGCGAGGGCG GCAAGGCCCG CTTCGCCTTC 
TCCGACCGCT GGGGCGGGGT CTCCAAGGCT CCTTACACCG CGACCAACCT CGGCGGGCAC
GTCGGCGACG ACCCGGAGGC GGTCGCCGCC AACCGGTCGC TGGTGGCCTT CGAGCTGGGG
TTCACCGACC CCGGCAACGT GGTGTACATG AACCAGATCC ACGGCGCGGA CGTGGCCTAC
GCCGCCGCGC AGTGGCAGGG CCGCGCCCCT GACGTGGACG CGCTGGTCAC CGACCGCCGG
CATCTGGCGC TGGCGGTGCT GGTCGCCGAC TGCGTGCCGG TGCTGCTGGC CGACGCCGAG
GCCGGCGTGG TGGCCGGGGC GCACGCCGGA CGGCCCGGGA TGAAGGCCGG CGTGGTGCCG
GCGGCGGTCG AGCGCATGGT GACCCTGGGC GCCGCGCCCG AGCGGATCGT CGCGGTCAGC
GGACCCTCGG TGTGCGGGCT CTGCTACGAG GTGCCCGAGC GCATGCGCGC CGACGTCGCC
GAGAAGGTCC CGGCCAGCTA CACGGTGACC CGGCAGGGCA CGCCCGGGCT GGACGTCGCT
GAGGGCGTGT GGGCACAGCT GGAGGCTTGC GGCATCGACC TGAAGTCCTC GGTCCGGCTG
CGGGTGTGCA CCCAGGAGTC CGAGGACTAC TACTCCTTTC GCGGCGAGGG GACGACCGGC
CGGTTCGCCG GGTTCGTCTG GCTGGACTGA
 
Protein sequence
MAIWQHTGPD GEGGKARFAF SDRWGGVSKA PYTATNLGGH VGDDPEAVAA NRSLVAFELG 
FTDPGNVVYM NQIHGADVAY AAAQWQGRAP DVDALVTDRR HLALAVLVAD CVPVLLADAE
AGVVAGAHAG RPGMKAGVVP AAVERMVTLG AAPERIVAVS GPSVCGLCYE VPERMRADVA
EKVPASYTVT RQGTPGLDVA EGVWAQLEAC GIDLKSSVRL RVCTQESEDY YSFRGEGTTG
RFAGFVWLD