Gene Caci_6090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6090 
Symbol 
ID8337453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7010323 
End bp7010790 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content70% 
IMG OID644959192 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003116786 
Protein GI256395222 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.441137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.170401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGTG CGACGCGCCG CGAGACCGAG CAGCGCGTGA TGACCGCGCT GCCGAGCTGG 
GTGAACACCA TCTCGCAGCT GAACCGCGTG ATCGCCGAGC GCATGGGGGT GACCGCCAGC
GACCTCGGCT GCCTGCACGT GCTGCACATG CAGGGCCCTG CGACAGCCGC CGAGCTGGCC
CGCGCCGTCG GCCTGACGCC GGGATCGGTC TCCCGCATGA TCGACCGCCT CGACGCCGCC
GGCTGCATCA CGCGCACCGA CGATCCCGAA GACCGGCGCC GCGTCCTGAT CGAGGCGTCC
ACCGAAGGAC TGGCACGGAT CGCCGCCTAC TACGACGGAC TCACCGCGCG GTCCCACGAG
GACCTGGCGG AATTCACGCT CGACGAGATG CTGGTACTGC TGCGCTTCAT CGAGCGATCG
CAGACCGGCG CCACCGAAGA ACTCGCACGG CTGCGGAGGG CGCAATGA
 
Protein sequence
MGRATRRETE QRVMTALPSW VNTISQLNRV IAERMGVTAS DLGCLHVLHM QGPATAAELA 
RAVGLTPGSV SRMIDRLDAA GCITRTDDPE DRRRVLIEAS TEGLARIAAY YDGLTARSHE
DLAEFTLDEM LVLLRFIERS QTGATEELAR LRRAQ