Gene Caci_6083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6083 
Symbol 
ID8337446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7005468 
End bp7006448 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID644959186 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003116780 
Protein GI256395216 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0861444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGAACTCAGA GCGGCCGGCA CCGTTCGGCA AGCGCTATGA GGTGCACGGC 
CGCAGTCTGC AGACATACCG GACCGGTGCT GCGGACGGGG ACGGAGACCT GAGCGCGGGC
GCGGGCGCCA CGGTCGTGCT CCTGCCCGGC GGCGGCTCGG TCGGCCTGGA CATGTGGCGA
GTCCAAGAAG GCGTCGCGCA GTTCGCCACC GTCGTGAGCT ACGACCGCGG CGGCACCGGC
TGGAGCAGCC GCGACGTGAC GCTCCCGCGC ACCTTGGCCG AAGTCACCGG CGAACTGCGG
AACCTGCTGG AACTCCTCCG CGCGGAAGGT GTCTCAGGGC CCTACATCAT CGTCGGCCAC
TCGCTCGGCG GGCTCTACGC GCGCTACTTC GCGACCCAGC ATCCCGAACA GGTCGCGGCG
CTGGTCCTGA TCGAGCCCGG GCACGAGGAC CTGCGCAAGT ACATGCCCAA GGAGCTGACC
GACCTCTGGG ACGGCTTCGA CCCCGACGCC GTCCTCCCGG ACGAGATCCA CGAGGTCCCG
CAAGAGATCA GGGACTTCTA CCGCGGCCTG TTCCAGGACG CCATGGCGCA GTTCCCCGCC
GAGATCCGCG AACCGCTGGT CGCCAACCAC GTCCACCGCG CCTGGCTGCG CGGCGGCATC
CAGGAGAGCT CGAACGTCAA AGCCCTCGGC GAGGAGATGC GCGCCGTCGC CGACGCCGTC
CCGGACGTGC CGACGGTGCT CCTGACCGCG ATGGACATCG ACCCGTTCAA GCGCGCGGTC
ATCGCCGGCA TGTCGGAGGA ACTGGTCGCG GCCGAAACCG CCGGCAAGCT GCGGCTCTAC
GACGAGGTCG CCGCCTCGTT CACGCACGGG GAGAACCGGC GCGTCGAGGG CGTCGGGCAT
GTGACACTGG TGATGCAGCG GCCCGACGCG GTCGTCGACG CTGTCAGGGA CCTGATGGGC
TTGTCGCGGC CCGCGCGATG A
 
Protein sequence
MTDPNSERPA PFGKRYEVHG RSLQTYRTGA ADGDGDLSAG AGATVVLLPG GGSVGLDMWR 
VQEGVAQFAT VVSYDRGGTG WSSRDVTLPR TLAEVTGELR NLLELLRAEG VSGPYIIVGH
SLGGLYARYF ATQHPEQVAA LVLIEPGHED LRKYMPKELT DLWDGFDPDA VLPDEIHEVP
QEIRDFYRGL FQDAMAQFPA EIREPLVANH VHRAWLRGGI QESSNVKALG EEMRAVADAV
PDVPTVLLTA MDIDPFKRAV IAGMSEELVA AETAGKLRLY DEVAASFTHG ENRRVEGVGH
VTLVMQRPDA VVDAVRDLMG LSRPAR