| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6081 |
|---|
| Symbol | |
|---|
| ID | 8337444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7003000 |
|---|
| End bp | 7004628 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644959184 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003116778 |
|---|
| Protein GI | 256395214 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.168714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAC TGGGGGTGTC CGATCCGCGG CGGATCGGTC CCTACCGGAT CTTCGCCCAG
CTGGGGCGCG GCGGTATGGG GCGGGTCTTC CTGGCCGGGG CGCCGGACGG GCGGCTCGTG
GCGCTCAAGC TGGTGCATGC GCAGCATGTC GAGGATCCCG GGTTCCGGGA GCGGTTCCGG
CGGGAGGTCG CGGCGTCGCG GCGGGTCTCG GGCGCCTATA CCGCGCCGGT GGTCGACGCC
GATGTCGAGA CCGAGATTCC GTGGCTGGTC ACGGTGTTCG TGCCCGGGCC CTCGCTGCGG
CAGGCGATCG ACGAGACCGG CGCGCTGCCG CCGGAGACCG CCGCGCGGCT GGCCGCCGGG
CTGGCCAGCG CGCTGGGCGA GATCCATGCC GCCGGGCTCG TGCACCGCGA TCTGAAGCCC
TCCAACGTGC TGCTGGCCGC CGACGGTCCG CGGGTCATCG ACTTCGGCGT GGCGCGCGCC
ACCGACGGAA GCACCAGCGA GCTCACGCAC ACCGGCTGGC TGGTCGGCTC GCCCGGCTAC
ATGTCGCCGG AGCAGGCCGA AAGCAAGACC TTGACCCCGG CCAGCGACAT CTTCTCCCTC
GGCGCGGTGG TCTACATGGC GTGCACCGGC ACCGAGCCGT TCATGGGCGC CTCGACCCCG
GCGACGCTCT ACAACGTGGT GCACGCCGAG CCCGACATCG ACGCCGTCCC CGAGGAACTG
CGCGGCATCG TCGGCGCCTG CCTGGCCAAG GACCCCGCCG CGCGCCCCAC GCCCGAGCAG
CTGCTGGCGC GGATCGGCGA CGTGCCGGCG CTGACCCGCA CCTGGCCGGA CGCCGTGGAC
GCGCTGATCA CCGAGCAGCA CGAGGCGGTC GTCACGGCAC TGCGGGACGG CGGCGCGCCA
CCGGACGTGG CGGTCGTGCC GCTGCTGCCG GCGGATCATC CGTTGTCGGA GACCGGCGCG
CGTCCCGCCG GAGTGACAGC GTGGGCTTCC CGCGCGCCGG AGGAGTCGAC GGTCGCCGGC
GGCGGTCGCG GTGCTGATGG TGGCGGTCGC GGGCGCCGTT CGCGAAGGGG TGTCACCGCA
GCCCTCGCTG TCGCGGCGCT CGCCGTCGGC GGCACGGCGG CGTCCCTGCT GGCGACGAGT
TCCGGCGGTC CCTCGTCCGC CGCGAACGCG CCGGAGTCCG CCCTGGCCGT CCCGGCAGCC
AGCCCTTCGA CATCCGACTC TCGCTCGGCG GACCCGGCGG ACCCGGCGGC TGCTGCGGCG
CCCTCGACCG CCGACTTGAC CACAGACTCG AACGCCGGCT CAGTCCCCGC GACCGACGTG
CCGACCGAGG CGGGCTCGAA GCCCACGACG CCCGCGCGCA CCGCGATCCC GACCTGCCTC
GGCGACAAGG AGGCGTACGC CCTCGCCGAG AAGAAGAACG GCTCGATGCC CGACGACGCG
AGGATCACCG TCCTGCGGTG CGACGGCGAC TGGGCCGGGG GACAGCTTTC CTCGGCGACC
GACGGCAACG CCGAGATCGT CTACCTGTAC CAGGCCGGGG CATGGACGGC GATCGACCTC
GGATCAGACG TCTGCACCGG TCCGGTCGAC AAGGCGCCTT CCGACGTCCG CAAATCCGTG
AACTGCTGA
|
|---|
| Protein sequence | MKPLGVSDPR RIGPYRIFAQ LGRGGMGRVF LAGAPDGRLV ALKLVHAQHV EDPGFRERFR
REVAASRRVS GAYTAPVVDA DVETEIPWLV TVFVPGPSLR QAIDETGALP PETAARLAAG
LASALGEIHA AGLVHRDLKP SNVLLAADGP RVIDFGVARA TDGSTSELTH TGWLVGSPGY
MSPEQAESKT LTPASDIFSL GAVVYMACTG TEPFMGASTP ATLYNVVHAE PDIDAVPEEL
RGIVGACLAK DPAARPTPEQ LLARIGDVPA LTRTWPDAVD ALITEQHEAV VTALRDGGAP
PDVAVVPLLP ADHPLSETGA RPAGVTAWAS RAPEESTVAG GGRGADGGGR GRRSRRGVTA
ALAVAALAVG GTAASLLATS SGGPSSAANA PESALAVPAA SPSTSDSRSA DPADPAAAAA
PSTADLTTDS NAGSVPATDV PTEAGSKPTT PARTAIPTCL GDKEAYALAE KKNGSMPDDA
RITVLRCDGD WAGGQLSSAT DGNAEIVYLY QAGAWTAIDL GSDVCTGPVD KAPSDVRKSV
NC
|
|---|
| |