Gene Caci_6076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6076 
Symbol 
ID8337439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6997410 
End bp6998840 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content72% 
IMG OID644959179 
Producthypothetical protein 
Protein accessionYP_003116773 
Protein GI256395209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.603696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG CCCGCCGCCA ACCCGTCGTG CCCTGGTACG CGGCCACCCG CGTCCTGCTG 
CTCCTGCTGG CGTTGAACGT GCTCCCGTAC TTCAACCGCG GCGCGGTCAC CGGCGACGTC
TCGACCTACC ACGGGTGGCT GGCCGGCTCG TTCGACCACG GCCGGTACCC GCTCGACGAC
CCGAAGTGGC AGTACCCGCC GGGCGCCGCC GCTCCCCTGG AGCTGCCGCA CCTGCTGCCC
GGCAGCTACT ACGTGCTGTT CTTCTTGATG TGTCTGGTCG CCGACGTGGC GGTCTTCGGA
ATGCTGCTGC GCGCCGCCCA GCGCGCCGAT ACCGAGCGCG CCACGCAGCC CGGGCCGCCC
GGGCAGCCGT CGCAAGCCGG ACCGTGGCTG TGGACGCTCG GCGTCGCCGC CATCGGACCG
ATGGCCTACG GCCGCTACGA CCTGGTCGTC ACCGCGTTCG CCGTCGCCGC GCTGACCGTG
ACGCTGCGCT CGAAGCGATC CACGGCGATC GCGCGCGGCG TCCTGATCGG CGTGGGCACG
TTCCTCAAGC TGTGGCCGGC GGCGTTCCTG TTCGGCGCGC CCAAGCGGCG CAACGGCCGC
CTGCTGGCCG GTGTCGCGGC GGCCGCCGCC GTGCTGCCCA CGCTGGCGCT GGAGCTGTTC
TTCCCCGGCG TGCTGTCCTT CCTGACCAAC CAGAAGAGCC GCGGCATCCA ACTGGAGTCG
GTGTTCGCCT CGCCGTTCCT GGTCGGCAAG TGGTTCGGCT GGTCGCACGA GATGCAGAAC
ACCAAGTACG GCGCCTATGA GTACCTCGGG ACCGGCGTCG GGGTGGCCGG CAAGGCGGCG
CTGGCCGCGA CAGTGGTCGG CTTCGGCGTC CTGCTGCTGA TCCGGCGGCG CGCCGCGGTC
CGCGGCGGCT TCCCGTTCCC GGCGATGTTC GCCGACGTCG GCTTCGCCGC CGTGCTGGTC
GCGGTCGTCA CCAGCCGCGT GCTGTCCCCG CAGTACCTGG TGTGGCTGCT CGGTGTCGCG
GCGGTATGCC TGACCCGCCG CGAGACCCTG ATGCGCACGC CGGCCTGGCT GGTCCTCGGC
GCGGTCTCGG TGACCCAACT GATCTTCCCG CTCTTCTACC ACTCGCTGCG CTACGGCCAG
GTCTACTCCG GCATGATCTT GTTCGGACGC AACGCGGTGC TGGTGGTCGC GGCGGTGCTG
GCCCTGCGCG CGCTGTGGCG GGCGACCGGT CCGGACGCCT CCGCCGCGAT GTTCTCAGGA
GGGCTTCTTG GCGAGTCCCG CGGCGACGGT GTGCGCCTGG CTCAGGACGA AGGCGCGCCA
CTTGACCGTG AAGTCGGCGG TCGTGGTCCC CAGGACGGTC CGGAACGCGT GGTCGACGGG
GTCGGCAGTC CCGGCCGGAG CGGTGCCGAC CGCCTTGTAG AAGGCGACTA A
 
Protein sequence
MRIARRQPVV PWYAATRVLL LLLALNVLPY FNRGAVTGDV STYHGWLAGS FDHGRYPLDD 
PKWQYPPGAA APLELPHLLP GSYYVLFFLM CLVADVAVFG MLLRAAQRAD TERATQPGPP
GQPSQAGPWL WTLGVAAIGP MAYGRYDLVV TAFAVAALTV TLRSKRSTAI ARGVLIGVGT
FLKLWPAAFL FGAPKRRNGR LLAGVAAAAA VLPTLALELF FPGVLSFLTN QKSRGIQLES
VFASPFLVGK WFGWSHEMQN TKYGAYEYLG TGVGVAGKAA LAATVVGFGV LLLIRRRAAV
RGGFPFPAMF ADVGFAAVLV AVVTSRVLSP QYLVWLLGVA AVCLTRRETL MRTPAWLVLG
AVSVTQLIFP LFYHSLRYGQ VYSGMILFGR NAVLVVAAVL ALRALWRATG PDASAAMFSG
GLLGESRGDG VRLAQDEGAP LDREVGGRGP QDGPERVVDG VGSPGRSGAD RLVEGD