| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6075 |
|---|
| Symbol | |
|---|
| ID | 8337438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6996114 |
|---|
| End bp | 6997286 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644959178 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003116772 |
|---|
| Protein GI | 256395208 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.353621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.425913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGCC GAGCTTTGAC GATTCTCGTG GTCACCAACG ACTATCCGCC CCGGCCGGGC
GGGATCCAGC AGTTCGTGCA GAACATGGTC GAGCGGCTGC CCGCCGAGCA GACCGTGGTC
TACGCGTCCT CCTGGCATGG CGACCCCGCG CGCTGCCGTG AGTTCGACTC GCAGCAGAAG
CACCGCGTGA TCCGCGAGAA GACCGGCATG CTGCTCCCGA CGCCGGACCG CACCAAGCGT
GCTGTGGCGA TCGCCAAGGA GATCGGGGCG GAGTCGGTGT GGTTCGGCGC CGCGGCTCCC
CTGGGGCTGA TGGCTCCGGC GCTGCGCAAG GCTGGCGTGC AGCGCATAGT GGCCACCACG
CATGGACACG AGTCGGGCTG GGCCAAGCTT CCCGGCGCGC GGGATCTGCT GCGCAAGATC
GCGGACGAGG TGGACTGCGT CACCTATCTG AACGAGTACC ACCGCGCCCG GATCGCCAAG
GCTCTGACGC GGTCTGCCGC CGCTCGGATG GTGCAGCTGA CGCCGGGGGT GGACGTCGAC
ATGTTCCGTC CGCATCCGGC CGGCGCTGCC GAGATGCGCG CTTCCCTGGG CCTGGCCGAT
CGCCCGGTGG TGGCATGCGT CTCCCGCCTG GTACCGCGCA AGGGGCAGGA CACGCTGATC
AGGGCTCTGC CACTGATTCG CCGCTCGGTT CCCGATGCCG CGCTGCTGAT CGGCAGTGGC
GGACCGTACA AGGAGACGCT GCAGAAGCTG GCGGTCGCCG AGGGCGTGGC CGAGCATGTG
GTGTTCACCG GCTCGGTGCC GTGGGAGAAG CTGCCGACCC TGTTCGCGGT CGGGGACGTG
TTCGCCATGC CGTGCCGCAC GCGCCGCTAC GGTCTGGACG TCGAAGGACT CGGCATCGTC
TACCTGGAGG CCTCGGCGGT CGGACTGCCG GTGATCGCCG GTGACAGCGG CGGCGCCCCG
GAGGCGGTGC TGGAGGGCGA GACGGGCTAT GTCGTCCCCG GCGACTCGAT CGAGCGCACG
GCGGCGCGCT GCGTGGAGCT GCTGAAGGAC CCCGCGAAGG CCAAGGCGAT GGGCGAACGA
GGCCGCGCCT GGGTCGAGGA GAAGTGGCAG TGGGACTCCA TCGCCGACAT CCTCCGCCGC
CTGCTGGACC CCGCGGCCAA GGTCGCGGCG TGA
|
|---|
| Protein sequence | MEGRALTILV VTNDYPPRPG GIQQFVQNMV ERLPAEQTVV YASSWHGDPA RCREFDSQQK
HRVIREKTGM LLPTPDRTKR AVAIAKEIGA ESVWFGAAAP LGLMAPALRK AGVQRIVATT
HGHESGWAKL PGARDLLRKI ADEVDCVTYL NEYHRARIAK ALTRSAAARM VQLTPGVDVD
MFRPHPAGAA EMRASLGLAD RPVVACVSRL VPRKGQDTLI RALPLIRRSV PDAALLIGSG
GPYKETLQKL AVAEGVAEHV VFTGSVPWEK LPTLFAVGDV FAMPCRTRRY GLDVEGLGIV
YLEASAVGLP VIAGDSGGAP EAVLEGETGY VVPGDSIERT AARCVELLKD PAKAKAMGER
GRAWVEEKWQ WDSIADILRR LLDPAAKVAA
|
|---|
| |