| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6072 |
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| Symbol | |
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| ID | 8337435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6992124 |
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| End bp | 6994607 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959175 |
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| Product | ABC transporter related |
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| Protein accession | YP_003116769 |
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| Protein GI | 256395205 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.163743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCGG ACTCCCTGAT CCGGGTCCAC GACGCCACCG AGCACAATCT GCGCCACGTC
GACCTGGCCA TCCCGCGCGA CCGGGTCGTG GCGTTCACCG GGGTGTCGGG GTCGGGCAAG
TCCTCGCTGG CGTTCGCGAC CATCTACGCC GAGGCGCAGC GCCGCTACCT GGAATCGGTG
GCGCCGTACG CGCGCCGCCT GATCGAGCAG GCCGGTGCGC CGCGGGTCGG GGGTATCAGC
GGTCTGCCAC CGGCGGTCGC GCTGCGGCAG CAGTACGGCG CGGGCAGCGC GCGCTCGAGC
GTCGGGACCG TCAGCCGGGT CTCGAACGTG CTGCGCATGC TCTACTCGCG CGCCGGAACG
TATCCGCCGG GCGCCGAACC GGTCGACTCC GACTGGTTCT CGCCGAACAC CGCGGTCGGC
GCCTGCCCGA CCTGCCACGG GCTCGGGCGG CGCTACACCG TCGAGGAGGA CCGGCTGGTC
GGCGATCCCG CGCTGAGCAT CCGGGGCGGG GCGGTCGCCG CGTGGCCCGG GGCGTGGCAG
GGGAAGAACT ATCGGGACAT CCTCGGCGAG CTGGGGATCG ACATCGACGC GCCGTTCCGG
ACACTGCCCG CCGAGCGGCG GCACTGGCTG CTGACCACCG AGGAGCAGCC GGTCGTCACT
GTGCATCCGG TGCGGGAGGC GCATCGGATC ACGCGTCCTT ATCAGGGCAC ATACATGTCG
CCGCGCAGCT GGGTGCTGCA CACGTATGCC ACCACCAAGA GCGCCTCGCT GCGGGCGAAG
GCGGCGTCCT TCCTGACCGA GGAGCCGTGC CCGACGTGCG AGGGACGGCG CCTGAATCCC
TTCGCGCTGA GCGTCACCGT CGCAGGGGTC GATATCGCTC GGGCGACCGC GCTCCCGCTC
ACCGACCTGG CCGATCTACT GCGCCGAGCC CGCGTTCACC CCGACACCGC CGCGCTGTCA
CCGGAACGCC GTCAGGCTGC CGAAGCCCTG ATCGGCAACC TCGAGGAGCA CATCAAAACC
CTGACGGAAC TCGGTCTCGG CTATCTCGGG ACCGACCGCA CCACCGCGAC ACTGTCCGGC
GGTGAGTTCC AGCGGCTGCA TCTGGCGACG CAACTCGGCA GCGGTTTGTT CGGGGTCTTA
TACGTCCTGG ACGAGCCCTC CGCCGGGCTG CACCCCGCCG ACACCGAGCT GCTGTTGACC
GCGTTGAAAC GCTTACGCGC CGCCGGGAAT TCGGTGTTCG TGGTCGAACA CAATCCGCGG
GTCATCGCCG ATGCCGACTG GATCGTGGAC CTCGGGCCCG GGGCGGGGAC GCATGGCGGG
CGCGTGCTGT ACAGCGGTCC GGGGGCGGGG TTGGAGGGCG TCGCCGAGTC GGCCACCGCG
CGGTATCTGT TCGGGAACAC GCCGAGCCTT CGGCCGGCGA GCGTCCGCAC ACCGTCCTCC
TGGCTGACGT TGTACGACGT CACGCGCCAC AACCTGGACC GCCTGACCGT CCGTTTCCCG
CTCGGCACGC TGACCGCGGT CACCGGCGTC TCCGGCTCCG GCAAGTCGAC GCTGGTCGGG
CAGGTGCTGG CGGCGACGAT CCGGGACCAC CTCGGGACAC CCGAGAGCAC CGAGAAGGAC
ACCGACGGCT CCGAGGACGA AGCCGCCGCC CTGGACGACG ACCGCATCGT CGCCATTCCC
AAGGCCGACG GGCTGGACGC CGTGCAGCGC CTGGTCCAGG TGGATCAGAA GCCGATCGGG
CGGACGCCGC GTTCGAACCT GGCGACGTAC ACCGGCCTGT TCGACGCCGT CCGCAAACTC
TTCGCGGCCC AACCACTGGC GAAGGAGCGC GGCTACACCG CCAGCCGCTT CAGCTTCAAC
CTGCCCGACG GCCGCTGCCC GAACTGTCAG GGCGAGGGGG TGGTGAGCGT CGAACTCCTT
TTCCTGCCTA CGGAATCCGC GCCGTGTCCG GTCTGCCACG GGGCGAGGTA CAACCCTGAG
ACGCTTCAGG TCCTGGTCGA CGGCAAGTCG GTCGCGGACG TGCTCGCGCT GAGCGTCGAG
GAGTCACTGG ATTTCCTCGA CCAACTGCCG ACCGCGCACC GCATCCTGCG CCTGCTCGAC
GACATCGGAT TGGGCTACCT CACCCTCGGG CAGAGCGCGA CGACCCTGTC CGGCGGCGAG
GCGCAGCGGA TCAAGCTGGT CAGCGAGCTG CATCGCGCGC GCCGCGGCCA CACCCTGTAC
CTGCTGGACG AGCCGACCAG CGGGCTGCAC CCCGCCGACG CCGACCTGTT GCTGGCGCGG
TTGCAGGAGC TGGTCGACCA GGGCAACACG GTCGTGATCG TCGAGCACGA CCTGCGCGTC
GCGGCGGCCG CGGACTGGCT GCTGGACCTC GGTCCCGGCG CCGGCGCGGA CGGCGGGCGG
ATCGTCGCGC AAGGGACGCC GGCCGAAGTA TCCAGTGGCG GATCCGGGCT CGCGGCGCGA
TTCTTGGCTG CGCACACCTC TTAG
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| Protein sequence | MGPDSLIRVH DATEHNLRHV DLAIPRDRVV AFTGVSGSGK SSLAFATIYA EAQRRYLESV
APYARRLIEQ AGAPRVGGIS GLPPAVALRQ QYGAGSARSS VGTVSRVSNV LRMLYSRAGT
YPPGAEPVDS DWFSPNTAVG ACPTCHGLGR RYTVEEDRLV GDPALSIRGG AVAAWPGAWQ
GKNYRDILGE LGIDIDAPFR TLPAERRHWL LTTEEQPVVT VHPVREAHRI TRPYQGTYMS
PRSWVLHTYA TTKSASLRAK AASFLTEEPC PTCEGRRLNP FALSVTVAGV DIARATALPL
TDLADLLRRA RVHPDTAALS PERRQAAEAL IGNLEEHIKT LTELGLGYLG TDRTTATLSG
GEFQRLHLAT QLGSGLFGVL YVLDEPSAGL HPADTELLLT ALKRLRAAGN SVFVVEHNPR
VIADADWIVD LGPGAGTHGG RVLYSGPGAG LEGVAESATA RYLFGNTPSL RPASVRTPSS
WLTLYDVTRH NLDRLTVRFP LGTLTAVTGV SGSGKSTLVG QVLAATIRDH LGTPESTEKD
TDGSEDEAAA LDDDRIVAIP KADGLDAVQR LVQVDQKPIG RTPRSNLATY TGLFDAVRKL
FAAQPLAKER GYTASRFSFN LPDGRCPNCQ GEGVVSVELL FLPTESAPCP VCHGARYNPE
TLQVLVDGKS VADVLALSVE ESLDFLDQLP TAHRILRLLD DIGLGYLTLG QSATTLSGGE
AQRIKLVSEL HRARRGHTLY LLDEPTSGLH PADADLLLAR LQELVDQGNT VVIVEHDLRV
AAAADWLLDL GPGAGADGGR IVAQGTPAEV SSGGSGLAAR FLAAHTS
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