Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6062 |
Symbol | |
ID | 8337425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6983880 |
End bp | 6984590 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959166 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003116760 |
Protein GI | 256395196 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.640142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAGA CAGTACGGAT ACTCACTTAT AACGTGCGGT CCTTAAGAGA CGACCGCGCA GCCCTGGCAC GCGTTGTGCG CTCTTGTGCG CCGGATGTGG TGTGCGTCCA GGAGTCGCCC CGCTTCTTCG GCTGGCAGCG TGCCGCGCGG ACGATGGCGG CGTCGTTCGG GCTCAGCGTG GTCGCCGGCG GCGCCAACGC CTCGGGCAAC CTGTTGCTGG CCGGGCCGAA CGTCGAGGTG GACGCCGCGG AGGTGCTCTA CCTGGAGCAC AAGCGGGGTT ACCACCTGCG GGGTATGGCG CTCGCCGCGC TGCGGATCGG CGCCAGCCGG TTCACCGTCG CCTCCACGCA CCTGAGCATG AATCTGGAAC AGCGCGTCCA CCAGGCCGGG GAGGTGCTGG GGCATCTCGA CGGGTTCGCC GAGCGCAACC AGACCACGTC GCGGGTCCTG GCCGGGGACT TCAACAGCTA CCCGGGCAGT GTGGAGTGGG GCATCCTCAC CGAGCGGCTG GCCGACGCGT GGATGGTCTC GCCGATGGGA GACGAGTTCA CCTCCACCGG ACCGAATCCC TATCAGCGGT TGGACGCGGT GTTCGTCTCC AGGGACGTCG ACGTCGTCCG CGCGGGCGTG CCGACGGACC TCATCGCCAA GGCCGACGAG GCGCTGGCCA GCGACCACCG GCCGGTGCTC GCGGTGCTGC GGATCGGGTG A
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Protein sequence | MEETVRILTY NVRSLRDDRA ALARVVRSCA PDVVCVQESP RFFGWQRAAR TMAASFGLSV VAGGANASGN LLLAGPNVEV DAAEVLYLEH KRGYHLRGMA LAALRIGASR FTVASTHLSM NLEQRVHQAG EVLGHLDGFA ERNQTTSRVL AGDFNSYPGS VEWGILTERL ADAWMVSPMG DEFTSTGPNP YQRLDAVFVS RDVDVVRAGV PTDLIAKADE ALASDHRPVL AVLRIG
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