| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6031 |
|---|
| Symbol | |
|---|
| ID | 8337394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6952353 |
|---|
| End bp | 6953219 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644959135 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiX protein |
|---|
| Protein accession | YP_003116729 |
|---|
| Protein GI | 256395165 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.321792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TGCTGATCGT CGGCCACGGC ACCCGCGACG CCGAGGGCGC CCAGGACTTC
CGCGCCTTCG TCGAACGCGT CGCCCGCCGC GCGCCGCAGG CCGTCGAGGC CGTGGACGGC
GGCTTCATCG AGCTGTCCGC GCCACCGGTC AGCGAAGCCG TGGCCCGCCT GGTCGGCGCC
GGCCACCACC GCGTCGCCGC CGTGCCGCTG GTCCTGGTCG CCGCCGGCCA CGCCAAGGGC
GACATCCCCG GCTCCCTGAA CCGCGAGCGC CTGCGCCACC CGGGCCTGTC CTTCTCCTAC
GGACGCCCGC TCGGCGTGCA CCCGACCATC CTGTCGCTGC TGGAAGCACG CCTGGACACC
GTCCTGCCCC GCGAGGAACG CGCCGACGCC GCAGTCCTGC TCGTCGGCCG CGGCTCCACC
GACCCCGACG CCAACGCCGA GGTCTACCGC GCCGCACGCC TGCTGTGGGA AGGCCGGGGC
ATCGGCATGG TCGAGACAGC CTTCGTATCC CTTGCGCAGC CTTCGGTTTC CGAAGGCCTG
GAGCGCTGCC GCCGCCTCGG CGCCAAGCGC ATCGTGGTCC TGCCGTACTT CCTCTTCCGC
GGCGTCCTGC CGGACCGCAT CGTCGAGCAG TCCGCGGGCT ACGACGTCGC TCCGGTCATC
GGCGACTGCG ACGAGCTCGC CGACCTTGTG CTGGAACGCC ACGCCGAAGC CGTCGCCGGC
GACATCCGGA TGAACTGCGA CACCTGCGTG TACCGCATCG CCATGCCAGG GTTCGAAGAC
AAGGTCGGAG CCGCGCAGGC GCCGCATCAC CACCCCGACG AGGACGGCCA CAGCCACCAC
CACAGCCACG CGCACTCCCA TGGATGA
|
|---|
| Protein sequence | MTALLIVGHG TRDAEGAQDF RAFVERVARR APQAVEAVDG GFIELSAPPV SEAVARLVGA
GHHRVAAVPL VLVAAGHAKG DIPGSLNRER LRHPGLSFSY GRPLGVHPTI LSLLEARLDT
VLPREERADA AVLLVGRGST DPDANAEVYR AARLLWEGRG IGMVETAFVS LAQPSVSEGL
ERCRRLGAKR IVVLPYFLFR GVLPDRIVEQ SAGYDVAPVI GDCDELADLV LERHAEAVAG
DIRMNCDTCV YRIAMPGFED KVGAAQAPHH HPDEDGHSHH HSHAHSHG
|
|---|
| |