Gene Caci_6029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6029 
Symbol 
ID8337392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6949867 
End bp6951306 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content70% 
IMG OID644959133 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_003116727 
Protein GI256395163 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA GCTACCTCGA CGCGGCCGAT CAGGCCGTGG AGCACGCGCT CGCGCTGGGG 
GCCCGCTACG CCGACGCCCG CGTCATGCAC CGCCGGACCG AGTCCATGTC CGCCCGCAAC
GGTGCCGTGG AGGCGCTGGA CCAGGGGGAG ACGGTCGGTA TCGGGGTGCG GGCGCTTGTC
GGGTCCAGCT GGGGTTTCTT CGCGACGCCG CATCTGGACG CGCCTTCGGT CCGCGCGGCC
GGACGGCAGG CGGTGGAGAT CGCCAAGGCC TCCTCGCGGG TCCCGGGCCC GGCGGCGATG
ATCCCGGCCG ATCCGGAGGT CGGCAGCTGG GCCAGCGAGT GCGAGGTGGA TCCGCTCGAG
GTGCCCGTCT CGGACAAGGG CGATCTGCTG ACGGCGGCCA CCGCCGAGAT GCGCTCGCAG
GGTGCTGACA TCGCGACCGG CATCTACCAG ATCTGGGACA CGCGCAAGTG GTTCGTCTCC
TCCGAGGGAC ACCGGATCGA CCAGCACATC CGCGAATGCG GCGGCGGGAT CTCGGCCACC
GCGGTCGGCG AGCGCGAGAC CCAGGTCCGC TCGTACCCCT CGCGGCGCGG CCAGTATGGC
ACCCGCGGCT GGGAGCTGGT CACCGAGCTC GACCTGGCCG CGCAGGCCTC CCGGATCGCC
GACGAAGCCC AGGCGCTGCT GCGTGCCCCG CAGTGCCCGT CGGGCCAGAC CGCGCTGATC
CTCGGCGGCG AGCAGTTGGC GTTGCAGATC CACGAATCCG TCGGCCACGC CATCGAACTG
GACCGCATCC TGGGCTGGGA GGCGGCGTAC GCCGGCACCT CGTGGCTGGA CCTGGCTCAG
CTCGGCACGC TGCAGTATGG CAGCGAGCTG ATGAACATCG TCATCGACGC CACCCACCCC
GGCGCGCTGG GTTCCTTCGG TTACGACGAC GAGGGAACCA AGGCCGGCAA ACGCGATGCG
GTCCGCAACG GCATCTGGAC CGGCGTGCTG TCCGGGCGGG AGAGCGCGGC TGTCGCAGGG
CTCGATTATG GCGGCAGCGT GCGGTCGACG GACTGGTCGC GGCTGCCGAT CGTGCGCATG
ACCAACGTCG GTCTGGAGCC GGGTCCGCAC ACGCTGGAGG AGATCATCGC CGCGACCGAC
GACGGGGTGT TCATGGACAT GAACCGGTCA TGGTCGATCG ATGACAAGAG ATTGAATTTC
CAGTTCGGCT GCGAGGTCGG CTACGAGGTG AAGAACGGCA AGCTCGGCCG CATGGTGAAG
AACCCGACCT ACACCGGCAT CGGCCCGAAG TTCTGGCAGA GCATGGACAT GCTCTCCCAC
GAGATCGTCG CCTGGGGCAC GCCGAACTGC GGCAAGGGGC AGCCCGGGCA GGTCGGGCAC
ACCGGCCATC CGGCGGCGCC GGCCCGTTTC CAGAACGTGC GAGTGGGGGT GCGCGGATGA
 
Protein sequence
MSSSYLDAAD QAVEHALALG ARYADARVMH RRTESMSARN GAVEALDQGE TVGIGVRALV 
GSSWGFFATP HLDAPSVRAA GRQAVEIAKA SSRVPGPAAM IPADPEVGSW ASECEVDPLE
VPVSDKGDLL TAATAEMRSQ GADIATGIYQ IWDTRKWFVS SEGHRIDQHI RECGGGISAT
AVGERETQVR SYPSRRGQYG TRGWELVTEL DLAAQASRIA DEAQALLRAP QCPSGQTALI
LGGEQLALQI HESVGHAIEL DRILGWEAAY AGTSWLDLAQ LGTLQYGSEL MNIVIDATHP
GALGSFGYDD EGTKAGKRDA VRNGIWTGVL SGRESAAVAG LDYGGSVRST DWSRLPIVRM
TNVGLEPGPH TLEEIIAATD DGVFMDMNRS WSIDDKRLNF QFGCEVGYEV KNGKLGRMVK
NPTYTGIGPK FWQSMDMLSH EIVAWGTPNC GKGQPGQVGH TGHPAAPARF QNVRVGVRG