Gene Caci_6008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6008 
Symbol 
ID8337371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6928932 
End bp6929522 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID644959112 
Producthypothetical protein 
Protein accessionYP_003116706 
Protein GI256395142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.795639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG ACCCGGGAGC CATCCCCAAC TTCGGCCCGC AGCAGCCGCC GCAGGGCCCG 
CCGCCGATCA TCAAGCCGGA CCCGAACCTG ATCGGCGACC TGTTCGAGCA GGTGGGGATC
AAGTACGGCA CCGATGACGA GGGCGACATC GTCGCCTCCT GGCCGGGCTT CCGCGTCTAC
GCCATGTTCC GCGGCGAGAA CAAGGAGCTG TTCGCGGTGC GCGCCTTCTA CGAGCGCGCG
TACCCGCTGG AGGAGAAGCA GGAACTGCTC GACGTCATCG ACGAGTGGAA CCGGGACTCG
CTGTGGCCGA AGGTCTACAC GCACACCAAC GAGGAGGGCG TGCTGCGCCT CGTCGGCGAG
TCGCAGATGG TCGTGCCGCA GGGCGTGAAC GTCGACTACT TCGTCTCCAG CGTCATGAAC
TGGGTGCAGG CCTCGATCGG CTTCAACGGC TGGCTGGCCG AGCGCCTCGG GCTCGAGGTC
GAGGTGGACT CGCTCGGCCG CGGCGAGGAC GACGCCGAGA ACGACAACGA TCTGCCCGGC
AACGACCTCC CGGACAAGGA CTTCCCCGGC GAGGACAAGA ACGACGGCTG A
 
Protein sequence
MTIDPGAIPN FGPQQPPQGP PPIIKPDPNL IGDLFEQVGI KYGTDDEGDI VASWPGFRVY 
AMFRGENKEL FAVRAFYERA YPLEEKQELL DVIDEWNRDS LWPKVYTHTN EEGVLRLVGE
SQMVVPQGVN VDYFVSSVMN WVQASIGFNG WLAERLGLEV EVDSLGRGED DAENDNDLPG
NDLPDKDFPG EDKNDG