| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6006 |
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| Symbol | |
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| ID | 8337369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6927387 |
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| End bp | 6928334 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959110 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003116704 |
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| Protein GI | 256395140 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.509599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.86931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACCG ACGCCCCGAC CCCCGAATCG GCGCTCAGCG CGCCGCCGCC GCCCGCGGAT
CTGTACGCGG TCCCGCGGCG ATCAGGGATG CTGGCGACCG CGGGGCTGCT CGCGACCACG
GCGGTGTGGG GATCGACGTT CCTGGTCGTG AAGGACGCGA TCGTCTCGGT GCCTGTCCTG
GACTTCCTCG GACTGCGCTT CGCCGTGGCG TGCGTGGCGA TGCTCGCGGT GCGCCCGCGC
GCGCTGGCGG CGCTGGGACG CAGCGGCTGG CGGCACGGGG TGCTGCTCGG GCTGGTGCTG
GCCGGCGGAT ACACGGCGCA GACGTTCGGG CTGCAAACCG CCTCGGCGTC GGTGTCGGGC
TTCATCACCG GGCTGTTCGT GGTGTTCACG CCGCTGATCG GCGCGGTGGT GCTGCGGCGA
AGGGTGCCGC CGACGGTGTG GGTGGCGGTG GTCCTGGCGA CGGTCGGACT CGGACTGATC
GCCTTGCATG GCTTGTCGAT AGGACGCGGG GAGCTGCTGA CGGTCGGCGG CGCGTTCTTC
TTCGCCCTGC ACATCGTGGG CTTGGGCGAG TGGTCGCACC GGCACGACGC GTACGCCCTT
GCGGTGGTGC AGATCGGGAC GGTCGCGGCG GTCTCGCTGC TGCTGGCGCT GGCCGGCGAC
ACCGAGCACG GCAGGCACAC GCTGACGCTG CCGCCGGACA CCGCGGGCTG GGCCGCGGTC
GGCGTGACGG CGCTGCTGGG AACGGCGGCG GGCTTCTTCC TGCAGACCTG GTCGCAGGCC
CGGATGCCGG CGACGCGCGC CGCGGTCGTG CTGACGATGG AGCCGGTGTT CGCCGGCGTG
ACCGGCGTGC TGGCAGGCGA GACGCTGGCC GTCCGCGGCT GGATCGGCGC GGCGCTGGTC
CTGGCGGCGA TGTACGCGGT GGAGCTGGGA CCTCGGCGCC AGAGGTAG
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| Protein sequence | MITDAPTPES ALSAPPPPAD LYAVPRRSGM LATAGLLATT AVWGSTFLVV KDAIVSVPVL
DFLGLRFAVA CVAMLAVRPR ALAALGRSGW RHGVLLGLVL AGGYTAQTFG LQTASASVSG
FITGLFVVFT PLIGAVVLRR RVPPTVWVAV VLATVGLGLI ALHGLSIGRG ELLTVGGAFF
FALHIVGLGE WSHRHDAYAL AVVQIGTVAA VSLLLALAGD TEHGRHTLTL PPDTAGWAAV
GVTALLGTAA GFFLQTWSQA RMPATRAAVV LTMEPVFAGV TGVLAGETLA VRGWIGAALV
LAAMYAVELG PRRQR
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