Gene Caci_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5998 
Symbol 
ID8337361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6919024 
End bp6919269 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content71% 
IMG OID644959103 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_003116697 
Protein GI256395133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.786244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG AGCAGACCAT GCAGCACACC ATGCAGCTGT CAGTGAACGG CGCGCCCTCG 
CAGATCGCCG AGGGCGCCAC CGTCGCGGAC CTGGTCGTCT CGCTGGTCGA GGCGGCCCGG
GACGGCAAGA AGGGCGGCAT CGCCGTGGCC GTCAACGAAA CCGTCGTCCC GCGCGCTTCC
TGGGACGGCA CCCCGCTCGC GGCCGGCGAC CGGGTGGAGA TCCTCACCGC CGTGCAAGGA
GGCTGA
 
Protein sequence
MSAEQTMQHT MQLSVNGAPS QIAEGATVAD LVVSLVEAAR DGKKGGIAVA VNETVVPRAS 
WDGTPLAAGD RVEILTAVQG G