| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5983 |
|---|
| Symbol | |
|---|
| ID | 8337346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6904775 |
|---|
| End bp | 6905965 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959088 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG family protein |
|---|
| Protein accession | YP_003116682 |
|---|
| Protein GI | 256395118 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.538368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCACCG GGACCCCGCG CCACCCTCGC CGGACCCTCG GCGTCGCCGC CGTCGCCACG
CTGATCGGCG GCGCCCTCGG CTCGGCCGCC GTGCCGGGCA CCGCGAACGC CACCGTGCAG
CCGGTGGCCA CACCGATTCC GCTGACCAGC GTGCCGACCG ACGGCGCCAC CGGCATCCAC
ACCGAGGTGC CGGTGAGCGT CACGGCCCAG TCCGGGGAGC AGCTCGCCTC GGTCACGCTG
GCCTCCCCCG ACGGCAGCAC CGTGCCGGGG TCGCTGAACC CCCAGGGCAC GGTGTGGACC
GCGGACGACC ACCTGCGGAC CCGCACCCGC TACACGCTCA CGGCGACCGG TGTGGCCGCC
GACGGCGCGC AGGTGACCCG CAGCTCGTCG TTCACCACCT TCGCGCCCTC GGCCGACAGC
CAGCTGAAGT TCCAGACCAC CGAGCCGCAG GACGGCGACC TGGTCGGCGT CGGCATGCCG
ATCCTGGTGC AGTTCACGCA CCCGGTGACC GACCGCGCGG CGGTGGAGAA GGCGCTGGTC
GTGCAGACCG ATCCGCCGCA GTCCGGACAC TGGAGCTGGC TGTCCGACGC CCGGCTGGAC
TGGCGTCCGG AGAGCTACTG GCAGCCGGGC ACCAAGGTCC GGGTGTCGCT GAACCTGGAC
GGCGTGCCGG CCGGATCCGG GCAGTACGGC GGGACCGACA CCTCCTTCGC CTTCAACGTC
GGCCGCAAGC AGATGTCGCT GGTGGACCTG TCCAAGCACC AGATGACGGT CTATGACAAC
GACAAGCCGG TCCGCACCCT GCCGGTCACC GGCGGCAAGC CGGGCGACGA CACCTGGGGC
GGGACCATGG CGGTCATCGA CAAGTCCTCC TCGGTCCACA TGACGTCGCG GTCGGTCGGC
TTCGGCGACG CCTACGACAT CCCGGACGTC CGGTGGGCGA TCCACCTGAC GTATTCGGGC
ACGTACATCC ACGCCGCCCC GTGGTCGGTC GGATCGCAGG GTTATGCGAA CGTCAGCCAC
GGCTGCGTCG GGCTGTCGAA CGACCGCGCC GCGTGGCTGT TCCAGAACAC CCTGCCCGGG
GACCTGGTGC AGGTGGTGAA CTCCCCGAAG ACGGTCGCGC CCGGCAACGG GTACGGCGAC
TGGATGGAGA GCTGGAACCA GTGGCTGAGC GGGAGCGCGG TGAAGGCTTA G
|
|---|
| Protein sequence | MRTGTPRHPR RTLGVAAVAT LIGGALGSAA VPGTANATVQ PVATPIPLTS VPTDGATGIH
TEVPVSVTAQ SGEQLASVTL ASPDGSTVPG SLNPQGTVWT ADDHLRTRTR YTLTATGVAA
DGAQVTRSSS FTTFAPSADS QLKFQTTEPQ DGDLVGVGMP ILVQFTHPVT DRAAVEKALV
VQTDPPQSGH WSWLSDARLD WRPESYWQPG TKVRVSLNLD GVPAGSGQYG GTDTSFAFNV
GRKQMSLVDL SKHQMTVYDN DKPVRTLPVT GGKPGDDTWG GTMAVIDKSS SVHMTSRSVG
FGDAYDIPDV RWAIHLTYSG TYIHAAPWSV GSQGYANVSH GCVGLSNDRA AWLFQNTLPG
DLVQVVNSPK TVAPGNGYGD WMESWNQWLS GSAVKA
|
|---|
| |