| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5981 |
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| Symbol | |
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| ID | 8337344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6902482 |
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| End bp | 6903258 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959086 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003116680 |
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| Protein GI | 256395116 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.951594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCC GACTCGACGG CAAGGTCGCC CTGGTGACCG GCGGTTCCCG CGGCATCGGC
CAGGCCATCG CGGCCACCTA CGCGGCCTGC GGCGCCCAGG TGGTGATCAG CTCCCGCAAA
ATCGACGGCC TGCAGCGCGC CGCCGAAGAG ATCCGCGCCG AGGTACCCGA CGCCCAGATC
GTCCCCTTCG CCGCCCACGC CGGCGACCCG CAGGCCGCCC ACGACTGCGT CCAGTTCGCC
GTGGAGACCT TCGGCACCCT CGACATCCTG GTCAACAACG CCGCCACCAA CCCCCACTTC
GGCAACGTCA TCGACGTGGA CCCGCCCCGC TTCGACAAGA CCGTCGAGGT GAACCTGCGC
GGCCCTCTCA TCTGGACCCA GGAAGCCTGG CGCCAGGCGA TGAACCCCGA AAGCACCCAC
CCCGGCGGCT GCGTGATCAA CCTGTCCTCG GTCAGCGGCC TGCAGTTCAA CGACCCCCTC
GGCGTCTACG GCACCACCAA GGCAGCCCTG ATCCACCAGA CCAAGCACCT CGCCGGCGAA
CTCGCCCCGG CAGTCCGCGT CAACGCCATT GCCCCCGGCC TGGTGAAAAC AGAATTCGCC
CGCATGCTGT GGGAAGGCGC CGAGCCCGAC GCCAAGTACC CCTGGGCCCT GGAGCGCCTC
GGCGAACCCC AGGACATCGC CAACGCCGCC CTGTTCCTGG CCAGCGACCT CGCCTCCTGG
ATCACCGGCG AGGTCCTGGT GGTCGACGGC GGCGCGATGA TCAAGGGCGG GATCTAG
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| Protein sequence | MDIRLDGKVA LVTGGSRGIG QAIAATYAAC GAQVVISSRK IDGLQRAAEE IRAEVPDAQI
VPFAAHAGDP QAAHDCVQFA VETFGTLDIL VNNAATNPHF GNVIDVDPPR FDKTVEVNLR
GPLIWTQEAW RQAMNPESTH PGGCVINLSS VSGLQFNDPL GVYGTTKAAL IHQTKHLAGE
LAPAVRVNAI APGLVKTEFA RMLWEGAEPD AKYPWALERL GEPQDIANAA LFLASDLASW
ITGEVLVVDG GAMIKGGI
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