Gene Caci_5976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5976 
Symbol 
ID8337339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6897829 
End bp6898440 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID644959081 
Productcholesterol esterase 
Protein accessionYP_003116675 
Protein GI256395111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.920315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA AACCCAAAGC CGAAGGCAAG GTCCGCTACC GCCGCGCGGC GATACCCGGG 
ATGGCCGCGC TGGCCGCCAC GGGTGCGCTG GTGGTCCTCA CCGCGCAAGG CGCCCTGGGC
GTGCAGTTCG CGATCTCCGG CATGCCGTTC GTGGTGACCG CGGACCACCT GACCGGGACG
AACTTCCAGC AGTTCGGCGA CCTGGACTCC GGCCTGAGCG GCAACCCCTG GCTGAAGAGC
TCTAACGGCC AGGCGGTGGT CATGACCTCG GTGATCGGCG ACGCGAAGGT CTACAACCTG
TGCCAGAGCG TGAACCTGGT CGGGGTCAAC CTGGTCATCC GCGCCGGGAC CGGCGCCACT
CCGGTGCACG CCACCAACCT GGTCCTGGAC TCCACGGACC TGACCGGCGA CGCGACCTTC
AACAACATCC AGATCGGCCG GGACGCCAGC GATCTGACCC AGGTGCCCAG CATCAAGGGG
CACGCCTACA CCTTCTCCCA GCAGGCTGAC TCGGTCGACA TCAAGAACGT CCGGCAGGAC
AACTACGCGT CCACCGCCTC GACGTTCTCG CTGCCCAACC TCAGCATGAG CTTCCAGAGC
AAGGGCTGCT GA
 
Protein sequence
MATKPKAEGK VRYRRAAIPG MAALAATGAL VVLTAQGALG VQFAISGMPF VVTADHLTGT 
NFQQFGDLDS GLSGNPWLKS SNGQAVVMTS VIGDAKVYNL CQSVNLVGVN LVIRAGTGAT
PVHATNLVLD STDLTGDATF NNIQIGRDAS DLTQVPSIKG HAYTFSQQAD SVDIKNVRQD
NYASTASTFS LPNLSMSFQS KGC