Gene Caci_5974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5974 
Symbol 
ID8337337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6895943 
End bp6897178 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content75% 
IMG OID644959079 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003116673 
Protein GI256395109 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGGAC CCTCCTTCGA CCCCAGCCCC AGCGACTCCG CGCCCGGGAA CGGCTCCGGC 
GGGGACGCCG CCGCCGCGCC GGCGCCGCGC TCGATCACCC CGACGACGGT GAAGGATCTG
CGCGACGCCG TCTCCACGGT CGGCGCCGTC CTCATCCGCG GCACCGGTAC CGCGACCACC
TGGGGCGCCC CGGTACGCGA CGCGCGCACG ACGGTGTCGC TGGCCGGCAT GGACCGCGTC
CTGGACCACC GGCCCGCCGA CATGACCGTG CACGTCCAGG GCGGGATCCG GCTGGACGTG
CTGCAGGCCG AGCTGGCCGA GCACGGGCAG TGGCTGCCGT ATGACCCGGC GCGCTCCGAG
GCGACCATCG GCGGGCTGCT GGCCACCGGC GACGCCGGAC CCCGGCGGCT GGCCTACGGC
TCGCTGCGGG AGCTGGTGAT AGGCGCGACG ATGGTGTTCC CGGACGGCGC GATCGCCAAG
AGCGGCGGAC ACGTCATCAA GAACGTCGCG GGCTATGACC TGGCGAAGCT GTGCCACGGC
TCGCTGGGCA CGCTCGGCGT CGTCGCCGAA CTCGTCCTGC GCGTGCACCC GCTGCCGCAG
ACCTCGCGCA CGGTGATGGT GCGCGACGTG GACACCGCGG CGGCGCAACA GCTCACCTGG
GCCCTGACCC GCTCGGCGAT CGAGCCGACG GCCGTGGAGT GGTGCGAGCC CGAGCAGGTG
CTGGCGGTGC GGTTCGACGG AACCGCCGAC GGCGCGGCGG CGCGGGCCGC CTCCGCGCGC
TCGATGCTCA CCGGCAGCCT GGCCGAACTC GACGCCGGCG AGGCGCACAG CTTTTGGGAG
TCGCACGCGG CGCGGGTCGT CGCAGAACCC GGAGACACCG TGCTGCGCGC CGCCACCCGC
CCCGGGATCG ACCCCGGGCT GGTCCGCGCG CTGTCGATGT TCGCCGAGTT CGCCGGGGTC
AAGGCGCTGC TCACGTGCAG CCCGGCCACC GGCGCGTACA CGGTCCGGGT CACCGGCGCC
GACGCCAAGG CGCACGCTGA GGTGGTGAAG AACTGGCGCG GCTCGGTCGA GGCCGTCGGC
GGCTTCGTGA TGCTGCGCCG CCGCCGCCCG GGGGTGGACG CGATGGTCGA GTCCTGGGGA
CGCGCGCCGG GCAGCGTCGA GGTGATGCGG CGGGTGAAGG GGAACTTCGA TCCGGAGAAC
CGGTTCGCGC CGGGGCGCTT CGCGCCGTGG TTTTGA
 
Protein sequence
MVGPSFDPSP SDSAPGNGSG GDAAAAPAPR SITPTTVKDL RDAVSTVGAV LIRGTGTATT 
WGAPVRDART TVSLAGMDRV LDHRPADMTV HVQGGIRLDV LQAELAEHGQ WLPYDPARSE
ATIGGLLATG DAGPRRLAYG SLRELVIGAT MVFPDGAIAK SGGHVIKNVA GYDLAKLCHG
SLGTLGVVAE LVLRVHPLPQ TSRTVMVRDV DTAAAQQLTW ALTRSAIEPT AVEWCEPEQV
LAVRFDGTAD GAAARAASAR SMLTGSLAEL DAGEAHSFWE SHAARVVAEP GDTVLRAATR
PGIDPGLVRA LSMFAEFAGV KALLTCSPAT GAYTVRVTGA DAKAHAEVVK NWRGSVEAVG
GFVMLRRRRP GVDAMVESWG RAPGSVEVMR RVKGNFDPEN RFAPGRFAPW F