| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5961 |
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| Symbol | |
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| ID | 8337323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6880911 |
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| End bp | 6882551 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959065 |
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| Product | Cholesterol oxidase |
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| Protein accession | YP_003116660 |
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| Protein GI | 256395096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA CATCAAGGCA CGACCCAGGA GCCCGAGGTC TGTCACGGCG CGGATTCCTG
GCCGGTACAG GCACGGTTCT GGGCGCGGCG GCCCTCGGCG GCCTGTCGGC CTCCCGGGCC
TCCGCCGCGC AGCGCAGCAC CCCCATCTCC AACGGAGCCC ACGTCCAGGC GCTGATCATC
GGCACCGGAT ACGGCGGCTC GGTCGCGGCG CTGCGGCTGG CCCAGGCCGG CATCGCGGTG
GAGATGATCG AGATGGGCAT GGCCTGGGAC ACCCCGGGGT CGGACGGGAA GATCTTCTGC
AACCTGACCA GTCCGGACCA GCGGTCCTTC TGGCTGCGGA CGCAGACCAA GCAGCCCGTC
GGCTACTTCC TCGGGATCCC GATCGACCGC GCCATCCCGA ACTACACCGG CATCCTCGAC
GCCGAGGACT TCGCCGGGAT CACGGTCTAC CAAGGGCGCG GCATCGGCGG CGGGTCCCTG
GTGAACGGCG GTATGGCGGT GACGCCGAAG CAGGAGAACT TCGGCGCGAT CCTGCCCTCG
GTGAACCCCG CCGAGATGTA CAACGTCTAC TACCCGCGCG CCAACGCCGG TCTCGGCGCC
GGCGTCGTCC CGCAGAGCTG GTTCACCAAA ACCGACTGGT ACCAGTTCGC GCGCGTCGGG
CAGAAGCAGG CCGGGCGGTC CGGGTTCCCG TTCCAGTTCG TGCCGGACGT GTACGACTGG
AACTACATGC AGCAGGAGGA CGCCGGCACG GTCCCGAAGT CGGCGCTGGG CCAGGAACTG
CTCTACGGCA ACAACTACGG CAAGAAGTCC CTGCAGAAGA CGTACATCCC GGCGGCGCTG
GCCACCGGCA AGGTGAACAT CTCCCCGCTG CACAAGGTGA CCTCGGTGTC CCCGGCCTCC
GGCGGCGGCT ACACGGTGCT GATGAACCAG CTGGACACCT CCGGGAACGT GGTCGTCACC
AAGGAGGTCA CCGCCGACAA GGTGGTCTTC GCCGCGGGCA GCGTGGGCAC CAGCAAGCTG
CTGGTCCAGA TGCGCGACAC CGGGCAGCTG CCGCACCTGA ACGACCAGGT CGGGCAGGGC
TGGGGCGACA ACGGCAACAT CATGGTCGGC CGGGCGAACC AGATCTGGGA CCCCACCGGC
TCCAAACAGT CCACGGTCCC GTGCGGCGGC ATCGACAACT GGACCAAGGG CGGCGCGTTC
GCCGAGGTGG CGCCGCTGCC GATCGGGATC GAGACCTGGG CCTCGCTGTA CCTGTCGATC
ACGAAGAACC CGCACCGCGC GCAGTTCACC TGGAACGCCG CCACGCAGAA GGTCGACCTG
AGCTGGCAGC TGGCGTGGAA GCAGGACGGC ATCACGATGG CCAAGAGCAT CTTCGACAAG
ATCAACTCCA CCGAGGGCAC CATCTACCGG ACCGACCTGT TCGGCTCGTA TAAGACCTGG
CAGGACCAGC TGACGTACCA CCCGCTGGGC GGCGCGGTGC TGAATCAGGC CACGGACAAC
TACGGCCGGC TGACCGCCTA TCCGGGCCTG TACGTGATGG ACGGCGCGCT GATCCCCGGC
AACACCAGCG TGAACCCGTT CGTCACCATC ACCGCGCTGG CCGAGCGCAA CATCGAGAAC
ATCATCGCCA ATGGCGGATG A
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| Protein sequence | MSATSRHDPG ARGLSRRGFL AGTGTVLGAA ALGGLSASRA SAAQRSTPIS NGAHVQALII
GTGYGGSVAA LRLAQAGIAV EMIEMGMAWD TPGSDGKIFC NLTSPDQRSF WLRTQTKQPV
GYFLGIPIDR AIPNYTGILD AEDFAGITVY QGRGIGGGSL VNGGMAVTPK QENFGAILPS
VNPAEMYNVY YPRANAGLGA GVVPQSWFTK TDWYQFARVG QKQAGRSGFP FQFVPDVYDW
NYMQQEDAGT VPKSALGQEL LYGNNYGKKS LQKTYIPAAL ATGKVNISPL HKVTSVSPAS
GGGYTVLMNQ LDTSGNVVVT KEVTADKVVF AAGSVGTSKL LVQMRDTGQL PHLNDQVGQG
WGDNGNIMVG RANQIWDPTG SKQSTVPCGG IDNWTKGGAF AEVAPLPIGI ETWASLYLSI
TKNPHRAQFT WNAATQKVDL SWQLAWKQDG ITMAKSIFDK INSTEGTIYR TDLFGSYKTW
QDQLTYHPLG GAVLNQATDN YGRLTAYPGL YVMDGALIPG NTSVNPFVTI TALAERNIEN
IIANGG
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