Gene Caci_5956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5956 
Symbol 
ID8337318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6876250 
End bp6876741 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID644959060 
Producthypothetical protein 
Protein accessionYP_003116655 
Protein GI256395091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTTT CCGTTGTCTG GGCCCGCGAG CCCATCCCGT CCGGACCGAG CGTCTTCCTG 
GCCGGTCCGA CCCCGCGCTC CAAGACCGTC GCTTCCTGGC GTCCGCAAGC GATTCAGGCT
TTGGACGCGG CATGGCAGGC GCCGCGGACG CTGCACATCC TGGTGCCGGA GAACCCCGGC
GGTCTGCGCG AAACCGAGTA CGAGGACCAG ATCGAATGGG AATGGGAGGG TTTGGACCGG
GCTTCGGCGA TTCTGTTCTG GATCCCCCGA GATCTGCGCA CTCTGCCGGG ATTCACCACG
AACGTGGAGT TCGGATTCGT CGCGGGCTCC GGCCGAACGG TGCTCGGCTG CCCGCCGGAG
TGCCCGAATC CGGAAAGGAA TCGCTACCTG ATCCGCCTGG CGCGCAGGTT GGGCGTAGCC
GTGACGGAGA CGATGGCTGA CACGGTCGCA GCGGCGATGG AGATCATCTC AATGATCGAC
GTCACACAAT GA
 
Protein sequence
MTVSVVWARE PIPSGPSVFL AGPTPRSKTV ASWRPQAIQA LDAAWQAPRT LHILVPENPG 
GLRETEYEDQ IEWEWEGLDR ASAILFWIPR DLRTLPGFTT NVEFGFVAGS GRTVLGCPPE
CPNPERNRYL IRLARRLGVA VTETMADTVA AAMEIISMID VTQ