| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5955 |
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| Symbol | |
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| ID | 8337317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6874675 |
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| End bp | 6876132 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959059 |
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| Product | Phospholipase C |
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| Protein accession | YP_003116654 |
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| Protein GI | 256395090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.599431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGA CCCGCCGCCG CCTGCTGACC ACCACCGCCG CCGCCACCTC GGCGCTGTCG
CTGCCGGCCT CGCTGACCAA GGCGATGGCC GCCGCCGCCC CGGATCTGCG GCTGCACTCG
CTCGACCAGA TCGAGCACGT CATGATCCTG ATGCAGGAGA ACCGCAGCTT CGACCACTAC
TACGGCACGA TGTCCGGAGT CCGGGGGTTC GACGACCGCG AGGCGATCCG CCTGCCGGAC
GGCCGTCCGG TCTTCTACCA GCCGGACCCG GCCAACCCCG ACGGCTACAC CCTGCCGTTC
CGCGTCGACA CCACCAAGAC CAGCGGAGCC AAGTACCCGA GCACCGACCA CGGCTGGCAC
GCCCAGCACA CCTCGTGGAA CGGCGGCGCG ATGGACGGCT GGATGGCCGC GCACCGCGCC
ACCGACGGCG GCCCGTGGTC CATGGGCTAC CTGACCAAGC AGGATCTGCC GTTCCACTAC
GCGCTCGCCG ACGCCTTCAC GATCTGCGAC AACTACCACT GCTCGGTCTT CGGGCCGACG
CATCCCAACC GGCTGTTCGC GATCAGCGGC ACCAACGACC CGGACGGCGC GGCCGGCGGG
CCGGTGGTGA GCAACGCCAA CCCGGCGCCG TTCCGCTGGA CCACCTACGC CGAGCGCCTG
GAGGCCGCGG GCATCAGCTG GCGCTACTAC GTCCCCAACA CCGCGGGCTC GGACCTCGGC
TGGTTCCAGC AGTTCCAGCA GGCGCCGCAG GATTCGTCCT TGTGGATCAA CGGGATGCAG
CCGCGGCCGC CGCAGGCGAT CGCCGACGAC ATCGCCAACG GCGACCTGCC CGCCGTCAGC
TGGCTGAACT CGCAGTACAT GCCCTCGATC GGGCTGCCGG AGGCCAGCGA GCACCCGCCG
GGGCTGCCCG GCGCCGGCGC GAACTACATC TGGGACGTGC TGGACGCGCT CGGGCAGCAC
CCTCAGGTGT GGGCCAAGAC GCTGCTGATC ATCACCTACG ACGAGAACGA CGGTCTGTTC
GACCACGTGC CGCCGCCGAC CGCGCCGCCC GGGACGCCGG GGGAGTGGAT CACGGTGGAC
CCGCTGCCGG CGGAGTGCCA GGGCATCGCC GGTCCCGCCG GGCTCGGGTT CCGGGTGCCG
ACGCTGGTCA TCTCGCCGTG GAGCGCCGGC GGCTACGTCT GCTCGGAGCT GTTCGACCAC
ACCTCGACGC TGCGGTTCCT GGAGCGGCGG TTCGGGGTGT GGGAGCCGAA CATCAGCCAG
TGGCGGCGCC ATACCGTCGG TGACATGACC AGGACGCTGC GTATGTCCCG TCCGGACACC
TCGTTCCCGA AGCTGCCGGA CGCCGCGGCG CTGTACCAGC AGGAGCTGAC CGAGGTCGCG
ACGCTGCCCG CGCCGGTACC GCCGACGGCG CAGCGGATGC CGCGCCAGGA CCCCGGACAC
CGCCGCCGAG TGGGGTGA
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| Protein sequence | MSLTRRRLLT TTAAATSALS LPASLTKAMA AAAPDLRLHS LDQIEHVMIL MQENRSFDHY
YGTMSGVRGF DDREAIRLPD GRPVFYQPDP ANPDGYTLPF RVDTTKTSGA KYPSTDHGWH
AQHTSWNGGA MDGWMAAHRA TDGGPWSMGY LTKQDLPFHY ALADAFTICD NYHCSVFGPT
HPNRLFAISG TNDPDGAAGG PVVSNANPAP FRWTTYAERL EAAGISWRYY VPNTAGSDLG
WFQQFQQAPQ DSSLWINGMQ PRPPQAIADD IANGDLPAVS WLNSQYMPSI GLPEASEHPP
GLPGAGANYI WDVLDALGQH PQVWAKTLLI ITYDENDGLF DHVPPPTAPP GTPGEWITVD
PLPAECQGIA GPAGLGFRVP TLVISPWSAG GYVCSELFDH TSTLRFLERR FGVWEPNISQ
WRRHTVGDMT RTLRMSRPDT SFPKLPDAAA LYQQELTEVA TLPAPVPPTA QRMPRQDPGH
RRRVG
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