| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5949 |
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| Symbol | |
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| ID | 8337311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6868172 |
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| End bp | 6869332 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959053 |
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| Product | solute-binding protein |
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| Protein accession | YP_003116648 |
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| Protein GI | 256395084 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGG CGATACTCGC AATCACCGCA CTCGGCGCCG CGGTTGCGTT GAGCGCAGCT
GGATGCAGTA GCTCTAAGAG CAGCAGCAGC GGTTCCACCA CGGGCGGTGG CAGCTCGACG
ACCAGCGCCG CTGCGGGCTC CAGCAGCAGC AGTAGCAGCA GTGGCACGCC CACGTACAAG
AACAACAAGG TCGGCATCCT GCTGCCGGAC ACCAACTCCT CGCCGCGGTG GGTCAACTCC
GACCCCGACG AGCTGAAGAC GCAGTGCGCG CAGTACGGCC TGACCTGTGA CATCCAGAAC
TCCAACGGTT CTGCCACGAC GATGACCTCG CAGGCGCAGT CGATGCTGAA CGAGGGCGTC
GGCGTGCTGA TGCTCACCAA CCTGGACTCC GGCTCGGCCA AGGCGATCGA GGCGCAGGCG
CAGGCCAAGG GCGTCGTCAC CATCGACTAC GACCGGCTCA CGCTCGGCGG CACCGCGCAG
TACTACGTCT CCTTCGACAA CGTGGCCGTC GGCAAGGCGC AGGGCACCGC CCTGACCAAG
TGCACCCAGG TCGCCGGCAA GACCGCGGTG AAGTACGTCG AGGAGGACGG CGCCGCGACC
GACAACAACG CGACGCTGTT CAAGCAGGGC TACGACAGCG TGCTGAAGGC GCAGACCGGC
TGGACCCAGG CCGGCGACCA GTCCGGCAAC TGGGACAACC CGGCCGGCAC CGCGCAGTCG
GTGTTCCAGA AGCTGCTGCA GGGCGCTCCG GACCTGAACG CGGTCATGGT CGCCAACGAC
GAGATGGCCA ACGCGGCCAT CACCGTCCTG AAGCAGCAGG GCCTCAACGG CAAGGTGGCT
GTCTCCGGCC AGGACGCGAC CGCGACCGGT CTGCAGAACA TCCTCAACGG CGACCAGTGC
TTCACGATCT ACAAGCCGGT CAAGGGCGAG GCCGACGTGG CCGTCAAGCT GGCCAGCCAG
GTCCTGTCCG GCCAGAAGCC GACCGCGCCG GCCGTGGTCC ACGACCCGAC CGGCAACCGT
GATGTCCCGT CCTACCTGGC GACCCCGGTC GTGGTGGACA AGTCCAACAT CACCCTGCCG
TTCACCGACG GCTACCAGAA GGCCGCCGAC GTCTGCACCG GCGACTTCGC CGCCAAGTGC
ACGGCGGCCG GCATCAAGTA G
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| Protein sequence | MRKAILAITA LGAAVALSAA GCSSSKSSSS GSTTGGGSST TSAAAGSSSS SSSSGTPTYK
NNKVGILLPD TNSSPRWVNS DPDELKTQCA QYGLTCDIQN SNGSATTMTS QAQSMLNEGV
GVLMLTNLDS GSAKAIEAQA QAKGVVTIDY DRLTLGGTAQ YYVSFDNVAV GKAQGTALTK
CTQVAGKTAV KYVEEDGAAT DNNATLFKQG YDSVLKAQTG WTQAGDQSGN WDNPAGTAQS
VFQKLLQGAP DLNAVMVAND EMANAAITVL KQQGLNGKVA VSGQDATATG LQNILNGDQC
FTIYKPVKGE ADVAVKLASQ VLSGQKPTAP AVVHDPTGNR DVPSYLATPV VVDKSNITLP
FTDGYQKAAD VCTGDFAAKC TAAGIK
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