| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5942 |
|---|
| Symbol | |
|---|
| ID | 8337304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6858536 |
|---|
| End bp | 6859294 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644959046 |
|---|
| Product | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein |
|---|
| Protein accession | YP_003116641 |
|---|
| Protein GI | 256395077 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAT TCAAAGTGGG CGTGCAGCTG CGCCCTCAAC ACACCGACAC CACCGCCCTG
CGCGAGGCGT GGCAGCGCGC GGACGCTCTC GGCGTGGACT CGATCTGGAC CTGGGATCAC
TTCTACCCGC TCGGCGGGGA TCCGGACGGG ACCCACTTCG AGGGCTCCAG CCTGCTCGCC
GCGATGGCCG TGACCACGAC GCGGGCCCGG TTCGGGATGC TCGTGCACTG CAACAGCTAC
CGCAATCCTG AGCTGCTGGC GGACATGGCG CGGACCGTGG ACCAGCTCTC CGGCGGACGG
TACGTGCTGG GTATCGGCTC GGGCTGGTTC GAGCGCGACT ACACCGAATA CGGCTATGAG
TTCGGGACCG CGCCGGAGCG GCTGCAGGCG CTGAAGGCGG CGCTGCCGCG GATCAAGGAG
CGGCTGGGCA AGCTCAACCC GGCCGCCGCC GACCTGCCGA TCCTGATCGG CGGCGGCGGG
GAGAAGGTGA CGCTGCGGCT GGTCGCGCAG TACGCCGACC TGTGGAACAC CTTCGGTCCG
GTGGAGAACT TCCGCCACAA GAACCAGGTG CTCGACGAGT GGTGCGCGAA GCTGGGCCGG
GACCCCAAGG CCGTGGAGCG CACCGTGATG ATCAATGACG ACGAGATCGA CAACTACCAG
GCGTATCTGG ACGTCGGCGC CGACCACATC ATCGTCGGCG GGGACCACCC GTTCGAGCTG
GACAACGTGC GGCGGCTGCT GGCGCACGCG CGCGACTGA
|
|---|
| Protein sequence | MARFKVGVQL RPQHTDTTAL REAWQRADAL GVDSIWTWDH FYPLGGDPDG THFEGSSLLA
AMAVTTTRAR FGMLVHCNSY RNPELLADMA RTVDQLSGGR YVLGIGSGWF ERDYTEYGYE
FGTAPERLQA LKAALPRIKE RLGKLNPAAA DLPILIGGGG EKVTLRLVAQ YADLWNTFGP
VENFRHKNQV LDEWCAKLGR DPKAVERTVM INDDEIDNYQ AYLDVGADHI IVGGDHPFEL
DNVRRLLAHA RD
|
|---|
| |