| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5925 |
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| Symbol | |
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| ID | 8337287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6837593 |
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| End bp | 6838138 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644959029 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 1 |
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| Protein accession | YP_003116624 |
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| Protein GI | 256395060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0950734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAGTTG AAGAAGTAGT ACTGCTCGCC GAAGACGGCA CGCCAATCGG CACCGCGCCC
AAAGCCACGG TGCACACCGA GAACACCCCG CTGCACCTGG CGTTCTCGTG CTACGTCTTC
GACGAGGAGA ACCAGCTGCT GGTCACCCGG CGTGCGGATT CCAAGCGCAC CTGGCCTGGA
GTGTGGACCA ACTCCGCGTG CGGACATCCC GGACCGGGGG AGTCCATCGA GGATGCCGTG
CGGCGCCGCC TCGCCAGTGA ACTCGGTCTC GATATCACTA CGATCCTGCC GCTGTTGCCG
GAGTTCCGTT ACCGCGCGGT AATGCCGAAC GGCATCGTCG AGAACGAAGT CTGTCCGGTG
TTCCGGGCCG TGGTCGCGAC GGGAATTACA CCGTCGCCAG ACCCCGACGA AGTAGGCGAA
TACCGCTGGA TTCCGTGGGC GGATTTCAGT CGTCAAGTAC TTTCCGGTGC CTTCGAGGTG
TCGCCTTGGT GCCGCCTTCA AGTCGAGCAG TTGGCCGCTC GGGATTTCGT CCTCGGGATG
TCGTGA
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| Protein sequence | MEVEEVVLLA EDGTPIGTAP KATVHTENTP LHLAFSCYVF DEENQLLVTR RADSKRTWPG
VWTNSACGHP GPGESIEDAV RRRLASELGL DITTILPLLP EFRYRAVMPN GIVENEVCPV
FRAVVATGIT PSPDPDEVGE YRWIPWADFS RQVLSGAFEV SPWCRLQVEQ LAARDFVLGM
S
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