Gene Caci_5907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5907 
Symbol 
ID8337269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6814402 
End bp6815328 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID644959011 
Product1-phosphofructokinase 
Protein accessionYP_003116606 
Protein GI256395042 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 
TIGRFAM ID[TIGR03168] hexose kinase, 1-phosphofructokinase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.686402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.900425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCA CGCTCACGCT CAACCCGGCA CTGGACATCA CGTACAGCGT CGCGGAGTTG 
AAGGCGGGGA CTACGCACCG ACCGCGCGTG TACGCACAGG CCGGCGGCAA GGGCGTGAAC
GTCTCGCGCA CGCTGCACGC CCTCGGACGC GAGACGGTCG CGGTCCTCCC GCTCGGCGGG
TTCGACGGCG AGGCGGTGCG CGCGGAACTG GAAGCCTCGG GGGTGCCGCA CCACGCGATA
CCCATTGCCG GAGCGACGCG GCGCACGGTC ACGGTGGTCG AGGGGTCGGG GCTCGCGACG
GGATTCAATG AATCAGGGCC CGAAGTCAGT GCCGACGAGT GGGCCGAGAT ATGCGCGGCG
GTGGGCTCGT TGCTGGAGAC GGCTGTGCTG GACGGTGCTC CGGTGCTGGT GTTGTCCGGC
AAGCTTCCGC GCGGTGTGGC CGACGATGCT TATGCGGAGT TGATAGCGCT CGCCGACGGG
TTCGGTGTGC CGACGATTCT GGACACTGAG GGTGCACCGT TGTTGGCCGC TCTTGCTGCG
CATCCGGCGA TTGTAAAGCC GAACGCGCAC GAACTTCTCG ATGCCACCGG GATGAGCGAT
TCCCGCGCTG CTGCTGCGGA ACTGCTGGAG CGGGGCGCTC GGGCTGTGGT CTCGTCCAAC
GGTCCGGACG GCTTGACCGC CTTGACCTCT GAGGGCAGCT GGAGCGCGCG CCCGCCGCGT
ATAGAGGGCG GAAATCCCAC TGGCGCTGGT GATGCCTCGG TCGCCGCGCT CGCTGTCGGG
CTCGTCGATG GCAGTCCTTG GCTCGAACTG CTTGCCGATG CTGCCGCGCT GTCGGCCGCG
ACCGTGCTCA CCGACCGCGC CGGGGTCTTC GACGCCGAGG CGTATGAGCG GTTCCGGTTT
GCGATCAGTG CCCACCCCGA AGACTGA
 
Protein sequence
MIVTLTLNPA LDITYSVAEL KAGTTHRPRV YAQAGGKGVN VSRTLHALGR ETVAVLPLGG 
FDGEAVRAEL EASGVPHHAI PIAGATRRTV TVVEGSGLAT GFNESGPEVS ADEWAEICAA
VGSLLETAVL DGAPVLVLSG KLPRGVADDA YAELIALADG FGVPTILDTE GAPLLAALAA
HPAIVKPNAH ELLDATGMSD SRAAAAELLE RGARAVVSSN GPDGLTALTS EGSWSARPPR
IEGGNPTGAG DASVAALAVG LVDGSPWLEL LADAAALSAA TVLTDRAGVF DAEAYERFRF
AISAHPED