Gene Caci_5906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5906 
Symbol 
ID8337268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6813506 
End bp6814384 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID644959010 
Productketose-bisphosphate aldolase 
Protein accessionYP_003116605 
Protein GI256395041 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.855659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGA AGCCCACCGG CGAGCTCGTC ACCGCCGCTC GCGCCGAGCG CCGTGCTCTT 
GCCGCTTTCA ATGTCATCAC GCTCGAGCAC GCTGAGGCGA TCGTCGCGGC GGCGGAAAGC
GTGCAGTCGC CGGTGATTTT GCAGATATCC GAGAACGCGG TGAAGTTCCA TCACGGCCGG
CTGGCTCCGA TCGCTCGCGC CACCGCTGCG GTTGCCGATG CCGCCGGGGT CGAGGTCGCG
CTGCACTTGG ACCACGTCGA GGATTCCGCG CTGCTGCGCC AGGCTGCCGA CTACGGCTTC
GGCTCTGCGA TGTTCGACGG CTCGCACCTG GACTACGCCG AGAACCTCGC CGCCACTCGC
GAAGCCGCCG ATTGGGCTCA CGGGCACGGC CTGTGGCTGG AGGCCGAACT CGGCAAGGTC
GGCGGGAAGG ACGGCGAGGC GCCGTTGTCT GCGCACGCTC CTGGCGCTCG CACGGATCCT
GACGAGGCGC GCGAGTTCGT CGCCGCGACC GGCGTGGACG CGCTGGCCGT CGCGGTCGGG
AGCTCGCATG CGATGACCGA CCGTAGCGCC GTGCTCGACC ATGAGCTGAT AGCGCGGCTG
CGTGACGCGG TCGGCGTTCC GCTGGTGCTG CATGGCTCCT CTGGCGTGCC GGATGCGGAG
TTGGCGCGCG CGGTCGCCGG TGGACTGGTG AAGGTGAATA TCGGGACCGC GTTGAACATC
GCCTTCACCG GGGCGGTGCG CGGGTGGCTG GAGCAGGCGC CGGAGAACGC GGTGGACCCT
CGCAAGTACT TGGCGCAGGC GCGCGAGGAG ATGGCGAAGA CCGCGGCGCA CTTCATCAGT
GCGTTGTCCG CGGACGGTCT GTCCCCGGAC GCCGACTAG
 
Protein sequence
MPLKPTGELV TAARAERRAL AAFNVITLEH AEAIVAAAES VQSPVILQIS ENAVKFHHGR 
LAPIARATAA VADAAGVEVA LHLDHVEDSA LLRQAADYGF GSAMFDGSHL DYAENLAATR
EAADWAHGHG LWLEAELGKV GGKDGEAPLS AHAPGARTDP DEAREFVAAT GVDALAVAVG
SSHAMTDRSA VLDHELIARL RDAVGVPLVL HGSSGVPDAE LARAVAGGLV KVNIGTALNI
AFTGAVRGWL EQAPENAVDP RKYLAQAREE MAKTAAHFIS ALSADGLSPD AD