Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5900 |
Symbol | |
ID | 8337262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6807290 |
End bp | 6808921 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959004 |
Product | acyl-CoA synthetase |
Protein accession | YP_003116599 |
Protein GI | 256395035 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGAC GCTGGAACAC TTCCGTGGCC GAGCTCCTCA CCGCCCGCGT CGGCGACCAC GCCACCGCGC TGACCTGGGC CGGACGTGAC GGTGTCGTGC GGCGCGTGTC GTGGGACGAG CACGTGCGGC GCAGTGCGGC GCGCGCCGCG TGGCTCGCTG AGCAGCTTCC GGCGCCGGGG GAGGGGGAAG CGCAGGCGCC GCGGCATGTC GGGGTGCTGA TGGAGAACGT GCCGGAGTTC TCCTTCCTGC TCGGCGCGGC GGCACTCGGC GGGTTCACCC TGGTCGGGCT GAACCCGACG CGCGGCGCCG CCGAGGTGGT GCGGGACGTC CGGCACACCG ACTGCGCGTT GGTCATCACC GAGTCCCCGT TCCTGGACAT GGTGCGCGAT TGCGGCGTGC CGGTGGTGAA CGTCGACGCG CCGCAGCGCT GGTTCAGCCC GCCGCGTAAC ACTTTCAGCG CCGGTGTCTA CCTCCGGGAC GTCCCCTTCA TGCTCATCCT GACCTCCGGC ACGACCTCCG CCCCGAAAGC CGTGATCTGC TCCCAGGGCA AGCTCGCTTC TCAGGGTTCG AGCTTGGCCA CCCAACGCGG TCTGACCAAA GACGACGTCC TGTACTGCGC GATGCCCCTG TTCCACAGCA ACGCCGTCAT CGCCTGCTGG ATCCCGGCGG TCGCCACCGG CGCGACCCTC GCTCTGCGCC GCCGCTTCTC CGCTTCCGGC TTCCTGCCGG ACGTCCGCCG CTTCGGCGCC ACCTACGCGA ACTACGTCGG CAAGCCGCTC GCTTACATCC TCGCCACCCC CGAGAAGCCC GATGACGCTG ACAGCACCCT GCGACAGGTC TTCGGCAACG AGGCGGCGCC GGCGGACGTC GAGCGCTTCG GCGCCCGCTT CGGCTGCCAG GTCACCGACG GCTTCGGCTC CACCGAGGGC GGGATCTCCT TCTACCGCCT GCCTTCCACG CCGCCGGGGG CGCTGGGCGT GCCGGTCGGG GACGTGCGGA TCGTCGATCC GGACAGCGGC ACGGAGTGCG GCGTCGGCGA GGTCGGGGAG ATGGTGAACT TCGCCGGCGC CGGAGCGTTC GAGGGCTACT ACAAGCACCG CGAGGCCGAC GCCGCCAAGC TGCGCGACGG CCGGTTCTGG TCCGGCGACC TGGCGTATCA GGACGCCGAT GGGAACTTCT TCTTCGCCGG GCGCTCCGGG GACTGGATCC GGGTCGGCGG GGAGAACTTC GCCTCCGGGC CGGTCGCGCG GGCCGTGGAG GAGTGGGAGC CGGCGGTCGC GGCAGCGGCG TATGGGGTGC CCGATGTCGC CTCGGGGGAC CAGGTGATGG TCGCCGTGGA ACTGCGCGAG GGAGTCGAAG GGTTCGATGC CGCAGCCTTC GCCGGCTATT TGGGGTCCCG GTCGGAGCTG GCAAAATTGT GGTGGCCCCA ATATGTGCGC CTCGTCGCCT CGATGCCGAG GACGGCCACG AACAAGGCGG TGGTCCGCGG ATTGGTGGAA GAGGCCTGGT GTACGCCGGA TCCGGTCTAC CTGCGCACCC CTTCCGGCTA CCGCAGGCTG ACCGATTCCG ACCGTGCCGA CCTGGCTCGG GAGTTCGCCC TCCACGGCCG CAGCGCGCCC CGCGCCCGGT AG
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Protein sequence | MTGRWNTSVA ELLTARVGDH ATALTWAGRD GVVRRVSWDE HVRRSAARAA WLAEQLPAPG EGEAQAPRHV GVLMENVPEF SFLLGAAALG GFTLVGLNPT RGAAEVVRDV RHTDCALVIT ESPFLDMVRD CGVPVVNVDA PQRWFSPPRN TFSAGVYLRD VPFMLILTSG TTSAPKAVIC SQGKLASQGS SLATQRGLTK DDVLYCAMPL FHSNAVIACW IPAVATGATL ALRRRFSASG FLPDVRRFGA TYANYVGKPL AYILATPEKP DDADSTLRQV FGNEAAPADV ERFGARFGCQ VTDGFGSTEG GISFYRLPST PPGALGVPVG DVRIVDPDSG TECGVGEVGE MVNFAGAGAF EGYYKHREAD AAKLRDGRFW SGDLAYQDAD GNFFFAGRSG DWIRVGGENF ASGPVARAVE EWEPAVAAAA YGVPDVASGD QVMVAVELRE GVEGFDAAAF AGYLGSRSEL AKLWWPQYVR LVASMPRTAT NKAVVRGLVE EAWCTPDPVY LRTPSGYRRL TDSDRADLAR EFALHGRSAP RAR
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