Gene Caci_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5900 
Symbol 
ID8337262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6807290 
End bp6808921 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content71% 
IMG OID644959004 
Productacyl-CoA synthetase 
Protein accessionYP_003116599 
Protein GI256395035 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC GCTGGAACAC TTCCGTGGCC GAGCTCCTCA CCGCCCGCGT CGGCGACCAC 
GCCACCGCGC TGACCTGGGC CGGACGTGAC GGTGTCGTGC GGCGCGTGTC GTGGGACGAG
CACGTGCGGC GCAGTGCGGC GCGCGCCGCG TGGCTCGCTG AGCAGCTTCC GGCGCCGGGG
GAGGGGGAAG CGCAGGCGCC GCGGCATGTC GGGGTGCTGA TGGAGAACGT GCCGGAGTTC
TCCTTCCTGC TCGGCGCGGC GGCACTCGGC GGGTTCACCC TGGTCGGGCT GAACCCGACG
CGCGGCGCCG CCGAGGTGGT GCGGGACGTC CGGCACACCG ACTGCGCGTT GGTCATCACC
GAGTCCCCGT TCCTGGACAT GGTGCGCGAT TGCGGCGTGC CGGTGGTGAA CGTCGACGCG
CCGCAGCGCT GGTTCAGCCC GCCGCGTAAC ACTTTCAGCG CCGGTGTCTA CCTCCGGGAC
GTCCCCTTCA TGCTCATCCT GACCTCCGGC ACGACCTCCG CCCCGAAAGC CGTGATCTGC
TCCCAGGGCA AGCTCGCTTC TCAGGGTTCG AGCTTGGCCA CCCAACGCGG TCTGACCAAA
GACGACGTCC TGTACTGCGC GATGCCCCTG TTCCACAGCA ACGCCGTCAT CGCCTGCTGG
ATCCCGGCGG TCGCCACCGG CGCGACCCTC GCTCTGCGCC GCCGCTTCTC CGCTTCCGGC
TTCCTGCCGG ACGTCCGCCG CTTCGGCGCC ACCTACGCGA ACTACGTCGG CAAGCCGCTC
GCTTACATCC TCGCCACCCC CGAGAAGCCC GATGACGCTG ACAGCACCCT GCGACAGGTC
TTCGGCAACG AGGCGGCGCC GGCGGACGTC GAGCGCTTCG GCGCCCGCTT CGGCTGCCAG
GTCACCGACG GCTTCGGCTC CACCGAGGGC GGGATCTCCT TCTACCGCCT GCCTTCCACG
CCGCCGGGGG CGCTGGGCGT GCCGGTCGGG GACGTGCGGA TCGTCGATCC GGACAGCGGC
ACGGAGTGCG GCGTCGGCGA GGTCGGGGAG ATGGTGAACT TCGCCGGCGC CGGAGCGTTC
GAGGGCTACT ACAAGCACCG CGAGGCCGAC GCCGCCAAGC TGCGCGACGG CCGGTTCTGG
TCCGGCGACC TGGCGTATCA GGACGCCGAT GGGAACTTCT TCTTCGCCGG GCGCTCCGGG
GACTGGATCC GGGTCGGCGG GGAGAACTTC GCCTCCGGGC CGGTCGCGCG GGCCGTGGAG
GAGTGGGAGC CGGCGGTCGC GGCAGCGGCG TATGGGGTGC CCGATGTCGC CTCGGGGGAC
CAGGTGATGG TCGCCGTGGA ACTGCGCGAG GGAGTCGAAG GGTTCGATGC CGCAGCCTTC
GCCGGCTATT TGGGGTCCCG GTCGGAGCTG GCAAAATTGT GGTGGCCCCA ATATGTGCGC
CTCGTCGCCT CGATGCCGAG GACGGCCACG AACAAGGCGG TGGTCCGCGG ATTGGTGGAA
GAGGCCTGGT GTACGCCGGA TCCGGTCTAC CTGCGCACCC CTTCCGGCTA CCGCAGGCTG
ACCGATTCCG ACCGTGCCGA CCTGGCTCGG GAGTTCGCCC TCCACGGCCG CAGCGCGCCC
CGCGCCCGGT AG
 
Protein sequence
MTGRWNTSVA ELLTARVGDH ATALTWAGRD GVVRRVSWDE HVRRSAARAA WLAEQLPAPG 
EGEAQAPRHV GVLMENVPEF SFLLGAAALG GFTLVGLNPT RGAAEVVRDV RHTDCALVIT
ESPFLDMVRD CGVPVVNVDA PQRWFSPPRN TFSAGVYLRD VPFMLILTSG TTSAPKAVIC
SQGKLASQGS SLATQRGLTK DDVLYCAMPL FHSNAVIACW IPAVATGATL ALRRRFSASG
FLPDVRRFGA TYANYVGKPL AYILATPEKP DDADSTLRQV FGNEAAPADV ERFGARFGCQ
VTDGFGSTEG GISFYRLPST PPGALGVPVG DVRIVDPDSG TECGVGEVGE MVNFAGAGAF
EGYYKHREAD AAKLRDGRFW SGDLAYQDAD GNFFFAGRSG DWIRVGGENF ASGPVARAVE
EWEPAVAAAA YGVPDVASGD QVMVAVELRE GVEGFDAAAF AGYLGSRSEL AKLWWPQYVR
LVASMPRTAT NKAVVRGLVE EAWCTPDPVY LRTPSGYRRL TDSDRADLAR EFALHGRSAP
RAR