Gene Caci_5894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5894 
SymbolfabG 
ID8337256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6801250 
End bp6802155 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID644958998 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003116593 
Protein GI256395029 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.342758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAT CGCTTACGGG CCGCGCCGCG ATCGTCACCG GCGCCGGCCG CGGCCTGGGC 
CGCGCCGAAG CCCTGGAGCT GGCCCGCCAG GGCGCCGCGG TCGTGGTGAA CGACCACGAC
CCGGAGATCG CCGAGGCCAG CGCCGCGGAC ATCGTGAAAG CCGGCGGCCA GGCGGTCGCC
TCCGCCGGCG ACGTCTCGGA CTTCGCCTAC GCCGAGTCCT TGACCCGGCT GGCGATCGAG
CAGCTCGGCT CCCTTGACAT TGTGGTCAAC AACGCCGGGA TCCTGCGCGA CCGCATGGTG
TTCTCCATGT CGGAGCAGGA ATGGGACGAC GTCCTGCGCG TGCACGCCAA GGGCCACTTC
GCACTCACCC GGCACGCCAC CGCCTACTGG CGCGACCGAT CCAAAGCCGA AGGCGGACCG
GTCTACGGGC GCATCGTCAA CACCTCCTCA GAGGCCTTCC TCGCCGGCGC CGCCGGGCAG
GCGAACTACG CGGCGGCCAA GGCGGCGATC GTCGGTCTGA CCACCGCCAC CGCCAACGGC
TGCGCGCGCT ACGGCATACG CGCCAACGCG ATCTGCCCGC GAGCCCGCAC CAAGATGACC
GAGGACGTCT TCGCCGGCTT CGAAGCACCG GCCGAGGGCA TGGACCCGCT GGCCGTCGAG
CACGTCGCCC CGCTGGTCGC CTACCTCGTC TCCCCGGCAG CCGACAAGGT CAACGGACAG
GTGTTCGTCG TGCACGGCGG CATGGTGCTG CTGATGCAGC GTCCGGTCGT CGAAGAACGC
TGGGATTCCA CGCAGGAGAC GTTCACCGTC GGCGAGCTGG AGACCGCGCT CGGTCCCTAC
TTCGCCGGCA AGGCGCCGAG TGAGAATTTC AGTGCCACAG ACGTGTTGTC GATGCGTCGG
CGGTGA
 
Protein sequence
MTPSLTGRAA IVTGAGRGLG RAEALELARQ GAAVVVNDHD PEIAEASAAD IVKAGGQAVA 
SAGDVSDFAY AESLTRLAIE QLGSLDIVVN NAGILRDRMV FSMSEQEWDD VLRVHAKGHF
ALTRHATAYW RDRSKAEGGP VYGRIVNTSS EAFLAGAAGQ ANYAAAKAAI VGLTTATANG
CARYGIRANA ICPRARTKMT EDVFAGFEAP AEGMDPLAVE HVAPLVAYLV SPAADKVNGQ
VFVVHGGMVL LMQRPVVEER WDSTQETFTV GELETALGPY FAGKAPSENF SATDVLSMRR
R