Gene Caci_5889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5889 
Symbol 
ID8337251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6796405 
End bp6797688 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content74% 
IMG OID644958993 
Productbifunctional RNase H/acid phosphatase 
Protein accessionYP_003116588 
Protein GI256395024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.733472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA CGTTCATCGT CGAGGCCGAC GGAGCCTCCC GCGGCAACCC GGGCCCGGCG 
TCCTACGGCG CCCTGGTCGC CGACGCCGCC ACCGGCGAGG TCCTGGCCGA ACTCGCCGAG
GGCCTGGGCG TGGTGACCAA CAACGTCGCG GAGTACCGCG GCCTGATCGC CGGCCTGCGC
GCCGCCTACG CCCTCGACCC CCACGCCGAG GTCGAGGTCC GCATGGACTC CAAGCTGGCG
GTCCAGCAGA TGAGCGGGGT GTGGCAGGTC AAGCACCCCG ACATCAAGCA GCTCGCCGTC
CAGGCGCGCA CGGCGTTCCC GCAAGCGGGC GCGGTGCGCT ACACCTGGGT GCCGCGCGCG
GAGAACAAGA GGGCTGACGC GCTGGCGAAC CTGGCGCTGG ACGACCCGGC GGCGGCCGCG
GCGAAGATGG CCGAGGCCGA GGTGATGACG GCGGCTTTCC GGGCGGCTCG TGCGGCTCGG
GAGGCTGGAG GCGGCGACGG TTCGGGTGGC GAGGGCGGCG CTGCGGCGGC AGCTGCCTCG
CAGCAGGAGG CGCTGCCCGG CATCAGCGAG AACACCGCTG CCGAGGCGGC GGTCACCACC
TCAAGCTCAA GCAACCCAGC ACCATCCTCA TACCAGCAAC CGAGCTGGTC CCCGGCACCC
GACATGGGCC CGCCGACCAC GCTCCTCCTC CTGCGCCACG GCGCGACCGC GCTCACCGCC
GAGAAGCGCT TCTCCGGCGC CGGCGACCCC GAACTCTCCG CCGTCGGCCT CCAGCAGGTC
GATGCCGTCG CCCGCCGGTT GGCCGCGCGT GGCGGCGTCG ACGCGATCGT CGCCTCGCCG
CTGGGACGCA CCGTGCAGAC CGCGCAGGCC GCCGCCGACG CGCTCGGGCT GCCGGTCGAG
ATCGACCCCG GCTTCCGGGA GACCGACTTC GGGCTCTGGG ACGGTTACAG CTTCGCCGAG
GTCCGCGAGC GCTGGCCCGC CGAGCACCGC GCCTGGCTGG CCTCGACCGC CGTCGCGCCG
CCGCAGGGGG AGTCCTTCGA CGCGGTCGCC GACCGCGTGC TGGCCGCGCG CGATGATCTG
ATCGCCCGGT ACGCGCGCCG GACCGTCCTG GTCGTCTCGC ATGTGACGCC TATCAAAACC
CTGATCCGCG ACGCGCTCGG CGCCCCGCCG GAATCCCTGT ACGCCATGGA GCTCTCGGCC
GCCTCGCTGT CGGTCCTCAC GTGCTATTCC GACGGCCGCG CCTCGATGCG CCTGTTCAAC
GACACCGCGC ATCTGACCGG TTGA
 
Protein sequence
MARTFIVEAD GASRGNPGPA SYGALVADAA TGEVLAELAE GLGVVTNNVA EYRGLIAGLR 
AAYALDPHAE VEVRMDSKLA VQQMSGVWQV KHPDIKQLAV QARTAFPQAG AVRYTWVPRA
ENKRADALAN LALDDPAAAA AKMAEAEVMT AAFRAARAAR EAGGGDGSGG EGGAAAAAAS
QQEALPGISE NTAAEAAVTT SSSSNPAPSS YQQPSWSPAP DMGPPTTLLL LRHGATALTA
EKRFSGAGDP ELSAVGLQQV DAVARRLAAR GGVDAIVASP LGRTVQTAQA AADALGLPVE
IDPGFRETDF GLWDGYSFAE VRERWPAEHR AWLASTAVAP PQGESFDAVA DRVLAARDDL
IARYARRTVL VVSHVTPIKT LIRDALGAPP ESLYAMELSA ASLSVLTCYS DGRASMRLFN
DTAHLTG