Gene Caci_5882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5882 
Symbol 
ID8337244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6790570 
End bp6790935 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content63% 
IMG OID644958986 
Producthypothetical protein 
Protein accessionYP_003116581 
Protein GI256395017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC TCGTACATCA CGTCACTTTC GATTGCGCCG ACCCCTATAA GCTCGCATCC 
TTCTGGGCGC AGGTCTTTGG CACGACGGTC CACCCTGAGG CTCAGCCCGG AGACGGCGAG
GTCGGCCTCG TGGGTTCCGA CCTGTTGTTC ATCCAGGTCC CTGAGTCGAA GACGATCAAG
AACCGCGTAC ATGTGGACCT TCAACCGCAA GACCGCACCC GCGATGAGGA GGTTGAGCGT
CTTCTCTCCC TCGGTGCGAC GCTGGCCGCC GACTTCCGGA AGTCTGACGG CACTGGCTGG
GCGGTCCTGA CCGACCCCGC GGGCAACGAG TTCTGCGTTG AACGCAGCAA GGCGGAACGC
GAGTAG
 
Protein sequence
MTSLVHHVTF DCADPYKLAS FWAQVFGTTV HPEAQPGDGE VGLVGSDLLF IQVPESKTIK 
NRVHVDLQPQ DRTRDEEVER LLSLGATLAA DFRKSDGTGW AVLTDPAGNE FCVERSKAER
E