Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5876 |
Symbol | |
ID | 8337237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6783688 |
End bp | 6784680 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644958980 |
Product | ABC transporter related |
Protein accession | YP_003116575 |
Protein GI | 256395011 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.145407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCA GGACCGCCGC TCCACCGCCC GCCATAGCGG TCCAGGACCT GCGCAAGCGC TTCGGAACCA CCGCGGCCCT CGACGGGATG TCCTTCGACG TCGCCGCCGG CAAGGTCACC GGCTTCGTCG GTCCGAACGG CGCGGGCAAG AGCACGACCA TGCGCGTCGT CCTCGGCCTC GACACGCCCG ACGAGGGACA GGCGCTGATC GGCGGCGTCC CCTACGCCAA GCTGCGCCGA CCGCTCGGCC ACATCGGCGC CCTGCTCGAC GCCGCCGCGC TCCAGCCCGG CCGCAGCGCG CGCAACCACC TGCTGTGGCT CGCGCACTCC CAAGGCCTGG GCACCAAGCG GGTCGACGAG GTCGTCGAGC AATCGGGCCT GGGCGAGGCG ATCCGGCGCA AGGCCGGCGG CTACTCCCTC GGGATGCGCC AGCGCCTCGG CATCGCCGCG GCGATGCTCG GCGATCCGCC GGTGGTGATG CTCGACGAGC CCTTCAACGG CCTGGACCCC GAGGGCATCG TCTGGATCCG CGGCTACCTG AAGGCGCTCG CCGCCGAAGG GCGCGCCGTC CTGGTCTCCA GCCACCTGAT GAGCGAGTTG GAAGGCTGCG CCGACCACCT GGTCGTCGCC GGACGCGGCA AGGTCATCGC CGACACCGGC GTCGCCGAGC TGATCGCGCG CTCCTCCGGA GGACGCGTGG TGCTGCGGAC CTCGGCGCGC GCCGAAGCCA CGACCGCGCT GGCGAACGCC GGCGGGACCG TCGCGGTCAC CGGACCGGAC CAGCTGACCG TGGACGGAGT CGCCGCCGAG AACGTGGTCA GGCTCCTGAA CTCCGGCGGC GTGCCGTTCG CCGAGGTCTC GGCACACCGT GCCTCGTTGG AGGAGGCGTA CATGGACCTC ACCCGCGACT CGGTCGAGTT CCGCGCAGCG ACCGCAGCGA CCTCCACCGC CACCACCGCC GGGATCGACG GAACCGACGG AGGAGCAGCA TGA
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Protein sequence | MTPRTAAPPP AIAVQDLRKR FGTTAALDGM SFDVAAGKVT GFVGPNGAGK STTMRVVLGL DTPDEGQALI GGVPYAKLRR PLGHIGALLD AAALQPGRSA RNHLLWLAHS QGLGTKRVDE VVEQSGLGEA IRRKAGGYSL GMRQRLGIAA AMLGDPPVVM LDEPFNGLDP EGIVWIRGYL KALAAEGRAV LVSSHLMSEL EGCADHLVVA GRGKVIADTG VAELIARSSG GRVVLRTSAR AEATTALANA GGTVAVTGPD QLTVDGVAAE NVVRLLNSGG VPFAEVSAHR ASLEEAYMDL TRDSVEFRAA TAATSTATTA GIDGTDGGAA
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