Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5875 |
Symbol | |
ID | 8337236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6782060 |
End bp | 6783691 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958979 |
Product | hypothetical protein |
Protein accession | YP_003116574 |
Protein GI | 256395010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.191888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCG ACCGCGACCG CTTCAGCCAC CTCGTCCACG CCGAGTGGAC CAAGCTGCGC ACCGTCCGCG GCTGGATGGT CGGCCTCGCA CTGGCCGCGA TCCTCACCGT CGCCCTCGGC ATACTCGGCC CGCTGGGCAG CACGATGTCC TGCGACCACG AAGGCAACGC CCCGACCCAC ACCTGCCACG TCAGCAGCCC GCCGAAGGAC GCCACCGGCC AGGAGATCAA CGACCAGTCC ACCTTCGTAC ACCGCACGCT GACCGGCGAC GGCAGCATCA CCGCACGCCT GACCACGTTC GGCGGGAAGT ACTCGCCCGA CGGCGGCGGA CCCCCGAACC CCGCCGACCC GACGGCCGGT ATGGCCGACG GCCTGCAGCC GTGGTCGAAG GCCGGGATCC TGGTCAAGGA CGGCACCGCC CAGGGCTCGG CGTACGCCGC GGTCCTGGCC ACTGGAACCC ACGGTGTCCG GATGCAGTAC GACTACACCC ACGACACCGC GGGCCTGGCG GGCCCGGTCA CCACCGCCGC GCCGCGCTGG CTGCGCCTGA CCCGCGCCGG CGACACGCTC ACCGGCTACG ACTCCGCCGA CGGCACCACC TGGACGAAGA TCGGCACCGC ACATCTGCCC AACCTGCCGG CCGGCGTCGA GGTCGGCGTG TTCGCCGCCT CGCCGGACTA CGCGGTCGTC AAGACCTCCT TCGGCGGCAG CTCCACCTTC AGCGGCCCGA GCCTGGCCAC CGGCACCTTC GACCAGATCG CGGTGACCGG GCAGAGTGCC GGCGGCTGGA CGCTCCCGCC GGTCCCCGGT GCGAACCGCG CCGACGGCGG CCAGGGCGGC GGCTCGGGCG GCCAGGGCGG TCCCGGCGGC AACGGGCAGG ATCTGCTGAG CACGGCCAGC GCCGTGCCGA ACGGCGCCGA CGGCTTCACC GTCACCGGAT CGGGCGACAT CGCCCCCGCC GTCGCCGGCG GCGTGGGCGC GGGCAAGACC CCGGAAAGCT CCCTGGCCGG AACCTTCGGC GGCCTCATCG CGGTGGTCGT GGTCGCCGCC CTGACCATGA CCTCGGAGTT CCGGCGCGGC CTGATCCGCA CCTCGCTGGC GGCCAGCCCG CGGCGCGGCC GGCTGCTCGC GGCCAAGGCC GTGGTGCTCG GCGGCGCGGC GTTCACGGTC GGCCTGGTCT CCGCGGCGAT CGCGGTCCCG ACGGTCGCCG CCGTGGAACA CAGCAAGCGT ATGTACGTGT ACTACGCCTC GACCCAGGCC GAGATCCGCA TGGTGGTCGG CACGGCGGCG CTGCTGGCCG TCGCGGCGGT GTTCGCCCTG GGCATCGCCA CCATCGTGCG GCGCGGAGCG GCAGCCGTCG CGGCGGTGAT CGTGGTGATC ATCCTGCCCT ACCTGCTCGC CGTCGCCTCG GTCCTGCCGG CCTCCGCCGC CCAATGGATC GCCCGCGTCA CCCCCGCCGC CGCCTTCTCC GTCCAGCAGA CGATCACGGC ATGGCCGCAG GTCGAGGCCG CCTACACGCC GACGAACGGC TACTACCCGC TCTCGCCGTG GCTCGGCCTG GCAGTGCTCT GCCTCTACGC GGCCGCTGCC TACGCCTTCG CGCACCGGCT GCTGCGACGG AGGGACGCGT GA
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Protein sequence | MIADRDRFSH LVHAEWTKLR TVRGWMVGLA LAAILTVALG ILGPLGSTMS CDHEGNAPTH TCHVSSPPKD ATGQEINDQS TFVHRTLTGD GSITARLTTF GGKYSPDGGG PPNPADPTAG MADGLQPWSK AGILVKDGTA QGSAYAAVLA TGTHGVRMQY DYTHDTAGLA GPVTTAAPRW LRLTRAGDTL TGYDSADGTT WTKIGTAHLP NLPAGVEVGV FAASPDYAVV KTSFGGSSTF SGPSLATGTF DQIAVTGQSA GGWTLPPVPG ANRADGGQGG GSGGQGGPGG NGQDLLSTAS AVPNGADGFT VTGSGDIAPA VAGGVGAGKT PESSLAGTFG GLIAVVVVAA LTMTSEFRRG LIRTSLAASP RRGRLLAAKA VVLGGAAFTV GLVSAAIAVP TVAAVEHSKR MYVYYASTQA EIRMVVGTAA LLAVAAVFAL GIATIVRRGA AAVAAVIVVI ILPYLLAVAS VLPASAAQWI ARVTPAAAFS VQQTITAWPQ VEAAYTPTNG YYPLSPWLGL AVLCLYAAAA YAFAHRLLRR RDA
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