Gene Caci_5872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5872 
Symbol 
ID8337233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6780221 
End bp6780655 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content68% 
IMG OID644958976 
Producthypothetical protein 
Protein accessionYP_003116571 
Protein GI256395007 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0817748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG ACTCCGAATA CGCCCCCAGC CCCGCCGACT ACGTGCGTGA GACCGTTGAC 
TTGTACGAGT CCTCCGGCGG CACCGAGGGC AACACCATGA AGGGCCGGCC GATCATCATC
CTGACCACGA CCGGGGCCAA GACCGGCAAG ACTCGCAAGA CCCCGTTGAT GCGGGTCGAG
CACGACGGCA CCTACGCCGT CGTCGCCTCC CTGGGCGGCG CGCCAAAGCA CCCGGTCTGG
TACTACAACA TCGTGGCCAA CCCGGAGGTC GAGCTCCAGG ACGGCGCGAC GAAGAAGGAG
TACGTCGCGC ACGAGGCGAC CGGCGAGGAG AAGGCGCAGT GGTGGGCGCG CGCCACCGAG
GCCTGGCCGG ACTACGCCGC CTACCAGACC AAGACCGACC GGGAAATCCC GCTGTTCGTG
CTCACGCCGC GCTGA
 
Protein sequence
MATDSEYAPS PADYVRETVD LYESSGGTEG NTMKGRPIII LTTTGAKTGK TRKTPLMRVE 
HDGTYAVVAS LGGAPKHPVW YYNIVANPEV ELQDGATKKE YVAHEATGEE KAQWWARATE
AWPDYAAYQT KTDREIPLFV LTPR