Gene Caci_5871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5871 
Symbol 
ID8337232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6779274 
End bp6780140 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content73% 
IMG OID644958975 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_003116570 
Protein GI256395006 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0382581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAAGG CGCACGGTGA CCCGGTGGAG ACGCACGCGA TAACGGCGGA CGCGGAGGCG 
GACGCGATAG CGCAGCTCGA AACGGCCGAG CACGCCGCCG AGCGCCATAT CCCCGAGCAC
CACACCCCCG AGCGGCACGC CCGCCACGGC TTGATACGCA CCTTCCACCC CCGCCGCGGC
CGCGCCAGCA CCACCCAAGC CGACGCGCTG ACCAGGCTCT GGCCGCTCTA CGGCTACACC
ATCCCCGATC CGCACCACGA CTACCACACC CCCGCCGTCG CCCCTGACGC CGCCTTCGAC
CGCCGGGCGC TGTTCGGCCG CGACGCGCCG CTGGTGCTGG AGATCGGCTG CGGCATGGGC
GAGGCGACCG CCGAGATGGC CGCCGCAGAC CCCGGCCGGG ACTACCTCGG CGCCGACGTG
CACACCCCGG GGCTGGGCAA CCTGATCGCG CTGGCCGAGG CGCGCGGCCT GGGCAACGTC
CGGGTGGCCC GCGGCGACGT GCTGTTCCTG CTGCGCGACT CGATCGCGCC CGGTTCGCTG
GCCGCCGTGC ACGTCTTCTT CCCCGATCCC TGGCCCAAGG CCAAGCACCG CAAGCGCCGC
ATCATCCAGC CCGACACCGT CGCCTTGATC CGCGACCGGC TGGCCGTCGG CGGCGTCCTG
CACTGCGCGA CCGATTGGGC CGAGTACGCC GAGCAGATGC TCGAGGTCCT GCAAGCCGAT
CCGGGTCTGC GCAACCGCTT CGACGGCTAC GCCCCGCGCG AAGCCGTCGG GCGTCCCCTC
ACCGGCTACG AGCGCCGCGG TCTGCGCGAC GGGCGTCCCA TCGCCGACTT CGTGTTCGAG
AAGATCGGGC CGGCGATCGG GTCCTGA
 
Protein sequence
MDKAHGDPVE THAITADAEA DAIAQLETAE HAAERHIPEH HTPERHARHG LIRTFHPRRG 
RASTTQADAL TRLWPLYGYT IPDPHHDYHT PAVAPDAAFD RRALFGRDAP LVLEIGCGMG
EATAEMAAAD PGRDYLGADV HTPGLGNLIA LAEARGLGNV RVARGDVLFL LRDSIAPGSL
AAVHVFFPDP WPKAKHRKRR IIQPDTVALI RDRLAVGGVL HCATDWAEYA EQMLEVLQAD
PGLRNRFDGY APREAVGRPL TGYERRGLRD GRPIADFVFE KIGPAIGS