Gene Caci_5868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5868 
Symbol 
ID8337229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6776197 
End bp6777042 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content72% 
IMG OID644958972 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003116567 
Protein GI256395003 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.139447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG TGACGGTCGA CAAGGAGAAC CACCTTCCCG TCGACATCCA CTACGAGGAC 
CGGGGCTCCG GCCGGCCGGT CGTGCTGATC CACGGCTGGC CGCTGTCGGT CGGCCAGTGG
GAGTTCCAGA TCCCGGACCT GCTGGCCGCC GGCCACCGCG TGGTGGCCTA CGACTGCCGC
GGGTTCGGGG TGTCGGCCAA GCCGCGAGGC GGCTACGATC CCGACACCCT GGCCGCCGAC
CTGCACATGC TCCTGGAGCA CCTGGACCTG CGCGAGGCGA CCCTGGTCGG CTTCTCCTCC
GGCGCCTGCA CGGCGGTGCG GTACCTGAGC CGCTTCGGCA ACCAGCGCGT GTCCCGCCTG
GCACTGGTCT CGGCCGCCGG ACCATACCTG CGCCGCACCG ACGCGCACCC CGAAGGCTTC
CTGGAGGACA CGAAGCTGCG CGAGTACCAG CGCTGCCTCA CCGACGACCG GGTCAGCTTC
CTGCACCGCT TCGCCACCAA GTTCTTCGAG GTCGCGCGGT CCTCAGCGGC GCGCCCGGTG
ATGCCGCAGC CGCTGCACAC CCGCGTGGTC ATGCTCGCCG CCGCCGCCTC GCACCGCGGC
GCGATCCAGA CCCTGGTCCA AGCCGTGACC ACCGACTACC GCAACGACCT GCGCGCCATC
ACCGTGCCCA CGCTGGTCGT GCACGGCGAG GCCGACGTCG TGCTGCCCGT GGAGGCCACC
GGCGCCCGCA TCGCCGAGGC GGTCGCCGAC AGCCGCCTGG TGCGGATGCA GGGAGCACCG
CACGGATTGA TCGTCACCCG CGCCGCAGAG TTCAATCGCG AACTGCTGGC GCACCTGGAG
GGGTGA
 
Protein sequence
MARVTVDKEN HLPVDIHYED RGSGRPVVLI HGWPLSVGQW EFQIPDLLAA GHRVVAYDCR 
GFGVSAKPRG GYDPDTLAAD LHMLLEHLDL REATLVGFSS GACTAVRYLS RFGNQRVSRL
ALVSAAGPYL RRTDAHPEGF LEDTKLREYQ RCLTDDRVSF LHRFATKFFE VARSSAARPV
MPQPLHTRVV MLAAAASHRG AIQTLVQAVT TDYRNDLRAI TVPTLVVHGE ADVVLPVEAT
GARIAEAVAD SRLVRMQGAP HGLIVTRAAE FNRELLAHLE G