Gene Caci_5864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5864 
Symbol 
ID8337225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6772583 
End bp6773608 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID644958968 
Producthypothetical protein 
Protein accessionYP_003116563 
Protein GI256394999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.777367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.408229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGGA AGATCACAGC ACGGAAGATC ACAGAAGTGA CGGTGGTCGC CGTGGCGGCC 
GTGGGAGCGG CGGGTCTTGC CAGACCGGTT GCGTCGCAGG CCTCGGATTC ATCCGCCACA
TTGCGATATC ACTGCGGCTT CCCGGTCATC GGGGTGCAGT CGGTGGTCGC CGAGGTCGCG
TGGACCATCC CGCCGACCGT CCAGGTGGGG CAGCCGATGG CGAGTTCGGT ACTCTCAGTG
CGGGCGACGA TTCCGCCACA GGTCGTGCTG ACCCTGAGGC TCCGCGGGGC GGCCAGCCTC
AGCGGTACCG CCGACATCGA CAGCGCCATC AACGCGCCGC AAGGTGTCGT CGCGGACAAG
GCCACGTTGA CCGTGCCCAA GGTGAGCGTT CCAGCGTTGG GATCGATGAC GGTCTCGGCC
AGCGGGAAGA CTCCCCCGGT CAGCCTGAGT CAGGCGGGCT CGGCGCACTT CGACGCCGGC
GCGATCGCGA TGCATCTGCG GGGATACACC GTCGGCGGTT CCCCCGAAGC GCCCTTCGAC
GTCGACTGCA CGCTCGATCG CGGACAGAGC GACGTCGTGG CGACGTTCGA GATCGCGGCG
GCTGCCCCGA CCTCCAGCGC GACGTCGAGC TCGGTGGCGC AGACGCCGAC TTCGAGCATC
AGCTCAACGG CTCAGCAGCC TGCGGCGAGC AGCGCATCAT CGTCCGGCGG CGCGGCTGTC
GTGTCTTCGA GTGCCGCTGC GACGGTGCCC ACGCGGCGTG AGAGCGTGCC GTCCGCTTCC
AGCGTGGAGG CGATCGCGCC GCTGACGACG TCGGATTCCG CTGCGACCGG CTCTGCCGTA
CCGACTGATT CCGTCCCCGC CGCCGCGGAG CACGCGACGA GCGGCACCGA CGCCGCAGCT
TCCCCTACCG CCGACAAGGG CGCGGCCGTC ACCGATTGGC TGATCGTGGC GTGCGCTCTG
CTGGCGGCTG GTGGCGCCGG GGTATTCACG ACGTCGCGGT TGAAGAAGCG GCAAAACATC
ACGTAA
 
Protein sequence
MRRKITARKI TEVTVVAVAA VGAAGLARPV ASQASDSSAT LRYHCGFPVI GVQSVVAEVA 
WTIPPTVQVG QPMASSVLSV RATIPPQVVL TLRLRGAASL SGTADIDSAI NAPQGVVADK
ATLTVPKVSV PALGSMTVSA SGKTPPVSLS QAGSAHFDAG AIAMHLRGYT VGGSPEAPFD
VDCTLDRGQS DVVATFEIAA AAPTSSATSS SVAQTPTSSI SSTAQQPAAS SASSSGGAAV
VSSSAAATVP TRRESVPSAS SVEAIAPLTT SDSAATGSAV PTDSVPAAAE HATSGTDAAA
SPTADKGAAV TDWLIVACAL LAAGGAGVFT TSRLKKRQNI T