Gene Caci_5863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5863 
Symbol 
ID8337224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6771734 
End bp6772531 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID644958967 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003116562 
Protein GI256394998 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.279453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG CCGACGTCAA CGGCCTGTCG ATGTACTACC GGGAGCACGG GGACGCCCCG 
GTCACCGAGG ACAACCCGGC GCTAGTGCTG CTGCACGGCG GGCTGTCGGG GTCCGACGAT
TTCGCCGCGC TCGTCCCGGA GCTGTCGGCG CACCGCCGGG TCATCACCGC GGACCTGCAG
GGCCATTCGC ACACCGCGGA CGTCGACCGC CCGATCCGCG TGGAGACGAT CGGCGACGAC
GTCGCGGCGC TGATCAAGCA CCTCGAACTG GGCAAGGCGG ACGTCATGGG CTACTCCTTC
GGCGGCGGCG CGGCGCTGCG CTGCGCGATC CAGCACCCGG ACGCGGTGCG CAAGCTGATC
GTGGTGTCGT TCCCGTTCCG CCAGGACGGC TTCTTCGAAG ACGTGCGTGC CCAGCAGCGG
CAGATGTCGC CGGAGTCGGC GGCGTTCATG AAGCAGACAC CGGCGTGGGA GCTCTACGAG
CGCACCGCCC CGCGCCCGGA GGACTTCCCG CAGCTTGTCG GCAAGATGGG TGAGTGGTTG
CAGCAGCCGT TCGACTATTC CGAGGAGATC CGCGGACTCC AGGTACCGAC GCAGCTGATC
TTCGCCGACG CCGACATGTA CTCGATGCAG CACATCTGCG ACTTCTGGGC GCTGCTCGGC
GGCGGGCAGC GCGACGCGGG GTGGGACGGC GCGGCGCGTC CGGGGGCGCA TCAGCTGGCG
GTGCTGCCGG ACACGACGCA CTACGCGATC TCCTCCTCTC CGGCGCTGGC TGGGACGGCG
GAGCGGTTCC TGCGTTAG
 
Protein sequence
MSYADVNGLS MYYREHGDAP VTEDNPALVL LHGGLSGSDD FAALVPELSA HRRVITADLQ 
GHSHTADVDR PIRVETIGDD VAALIKHLEL GKADVMGYSF GGGAALRCAI QHPDAVRKLI
VVSFPFRQDG FFEDVRAQQR QMSPESAAFM KQTPAWELYE RTAPRPEDFP QLVGKMGEWL
QQPFDYSEEI RGLQVPTQLI FADADMYSMQ HICDFWALLG GGQRDAGWDG AARPGAHQLA
VLPDTTHYAI SSSPALAGTA ERFLR