| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5860 |
|---|
| Symbol | |
|---|
| ID | 8337221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6769464 |
|---|
| End bp | 6770315 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958964 |
|---|
| Product | peptidase M55 D-aminopeptidase |
|---|
| Protein accession | YP_003116559 |
|---|
| Protein GI | 256394995 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2362] D-aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.358603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCT TCATCAGCGC GGACATGGAG GGGATCACCG GGCTCGTCGA CGCCGACGAC
GTGCAGCCCG GCGGCCGCGA CTACGAGCGC GGGCGGCTGG CGATGACCGG GGACGTCAAC
GCCGCCGTCC GCGGCGCGCT GCGGGCCGGC GCCACCGAGA TCGTGGTGAA CGACGCCCAC
GGACCCATGC GCAACCTGAT GACCGACACC CTGCACCCCG CCGCCCGCCT GATCCGCGGC
AAGCCCAAGA CCATGGGCAT GATCGAGGGC CTCACCGGCG CCCACGACGC CCTCATCTGC
GTCGGCTACC ACGCCCGCGC CGGCGCCCAC GGCGTCCTGA GCCACAGCTT CATGGGCCAC
GAGATCGAGG ACATGTGGCT CGACGACCGC GCCACCGGCG AGATCGGCCT GGTCCACGCC
GCCGCCGCCG CGCTCGGCGT CCGCCTCGCC GCCCTCACCG GCGACGACGC CGCCTGCGCC
GAGGCCACCG CCTGGGACGC GAGCATCGCC ACCGCGCCGG TGAAGTACGT ACGCAGCCGC
TTCGCCGCCG AACTACGCCC CGAGAACGAG GCGCGGGCGG CGATCGAGGA CACGATACTG
GCGGTGCTCA ACGAAATGCC TGCCGACGAC GGCGAACACA CGTCTTCCGA TGCCGTTTCC
GATGCTGAGT CCACGCTCGC CGTCCGCTGG CAGTCCTCGG CAGTAGCTGA GACTCTGCTC
GGCATCCCCG GCGTGACCGC GGTCGACCCG CGCACAGTCC AAGCCGTCGG CACGCCCCCG
GACCTGTTCC GCCAGTTCGG CGTATGGATG CGCGTCGCCT CGGCGCTGAC GAACCAGGCT
CCCTACTGCT GA
|
|---|
| Protein sequence | MRIFISADME GITGLVDADD VQPGGRDYER GRLAMTGDVN AAVRGALRAG ATEIVVNDAH
GPMRNLMTDT LHPAARLIRG KPKTMGMIEG LTGAHDALIC VGYHARAGAH GVLSHSFMGH
EIEDMWLDDR ATGEIGLVHA AAAALGVRLA ALTGDDAACA EATAWDASIA TAPVKYVRSR
FAAELRPENE ARAAIEDTIL AVLNEMPADD GEHTSSDAVS DAESTLAVRW QSSAVAETLL
GIPGVTAVDP RTVQAVGTPP DLFRQFGVWM RVASALTNQA PYC
|
|---|
| |