| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5859 |
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| Symbol | |
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| ID | 8337220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6767667 |
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| End bp | 6769343 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958963 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003116558 |
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| Protein GI | 256394994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.63248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT GGTGGCGTGA CGCTGTCATC TACCAGGTCT ACATACGCAG CTTCGCCGAC
GGAAACGGCG ACGGGGTCGG GGACGTCGCG GGACTGCGGT CGCGGCTGCC GTACCTGGCG
GCGCTCGGGG TGGACGCGTT GTGGCTGAAC CCTTGGTATG CCTCACCGCA AGTGGATGCG
GGGTACGACG TCAGCGACTA CCGGCGGCTG GATCCGTTGT TCGGGACGTT GGAGGATGCC
AGAGGGCTGA TCGCCGACGC GCACGCGCAC GGGCTGCGGC TGATCCTGGA CATCGTTCCG
AACCACACTT CGGATCAGCA TCCTTGGTTC CAGGACGCGC TGGCCGCTTC GCAGGGTTCT
GAGTCACAGG GTTCTGGGTC ACAGGGTTCC GAGGCACGGG CGCGGTACCA CTTCCGCCCG
GGGCGGGGCG TGGACGGGGC GGAGCCGCCG ACGGACTGGC CGTCGATCTT CGGCGGTCCG
GCGTGGACCC GGACGGTGGA CGCCGACGGG AAGCCCGGGG ACTGGTATCT GCACTTGTTC
GCGCCGGAGC AGCCGGACCT GAACTGGACG AACGCCGAGG TGCGGCGCGA GTTCGAGGAC
ATATTGCGGT TCTGGCTGGA CCTGGGTGTC GACGGGTTCC GGATCGACGT CGCGCACGGA
CTGACGAAGG ACCCTGCGTT CCCGGATCTG GCTGCGCGCG CCGCCGGGGG GATGCTGGAC
GGGGTGGCGG CGGACCATCC GTACTTCGAC CGGGACACGA CGCTGGCGAT CTATGAGGAG
TGGCGCCGGG TCGCGGATTC CTACGAGGGC GAGCGGGTTT TCGTCGCCGA GGCGTGGGTC
GCGGACGCGG CGCGGGTGGC GCGGTATCTG ACGCCGGCGC GGCTGCACAC GGCGTTCAAC
TTCGGCCTGC TGGGCTGCCC GTGGGACGCC GCGGCGCTGC GTGCGGAGAT CGACGCGACG
CTGGGCGTGC TGGCGGCGGT CGGCGCGCCG GCGACCTGGG TGCTGTCCAA CCACGACGTG
ATCCGCCACG CGACGCGCTA CGGCCGCGCC AAGACCTCGC TGGCCGACGC ACGCCGCCTG
TACGGCACGC CGGTGGACCA TGCGCTCGGC GAGCGCCGGG CGCGCGCGGC GATGCAGCTG
ATCAACGCGC TGCCCGGCGG CACGTATGTG TACCAGGGCG AGGAGCTGGG CCTGCCGGAG
GTCGAGGACC TACCGCCCTC GGTCTGGCAG GACCCGAACC GCCGCTACGC GGACCACGAC
GGCCCGGTGC GCGACGGCTG CCGCGTGCCG CTGCCGTGGT CGGGCGACAC GGCGCCGTTC
GGCTTCTCGC CGGAGGGCGC GACGGCGGAG CCCTGGCTAC CGCAACCGCA GGAGTGGAAG
GACCGCACCG CCGCAGCCGA GGAGCAGGAC CCGCACTCGA CCCTGTCGCA CTACCGCACC
CTGCTGCGCA CCCGCCGCGA GTGGCTCGAC CGCGGCCTCG GCGACGGCGC GGCGCCGGAG
TGGCTCAAGG CACCGGCGGA CGTGCTGGCG TTCCGGCGCG GCGAGGTGGT GTGTTACGTG
AACCTGTCGG AGGCCGAGGT GGAGTTGCCG GCGGGGTACC GGGTGCTGGT CGCCTCGGAG
CCGGTGGACG GGGCGCTGCT GCCGGTGGAT GTGGCGGTGT GGTTGGTGGC GGAGTAG
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| Protein sequence | MSNWWRDAVI YQVYIRSFAD GNGDGVGDVA GLRSRLPYLA ALGVDALWLN PWYASPQVDA
GYDVSDYRRL DPLFGTLEDA RGLIADAHAH GLRLILDIVP NHTSDQHPWF QDALAASQGS
ESQGSGSQGS EARARYHFRP GRGVDGAEPP TDWPSIFGGP AWTRTVDADG KPGDWYLHLF
APEQPDLNWT NAEVRREFED ILRFWLDLGV DGFRIDVAHG LTKDPAFPDL AARAAGGMLD
GVAADHPYFD RDTTLAIYEE WRRVADSYEG ERVFVAEAWV ADAARVARYL TPARLHTAFN
FGLLGCPWDA AALRAEIDAT LGVLAAVGAP ATWVLSNHDV IRHATRYGRA KTSLADARRL
YGTPVDHALG ERRARAAMQL INALPGGTYV YQGEELGLPE VEDLPPSVWQ DPNRRYADHD
GPVRDGCRVP LPWSGDTAPF GFSPEGATAE PWLPQPQEWK DRTAAAEEQD PHSTLSHYRT
LLRTRREWLD RGLGDGAAPE WLKAPADVLA FRRGEVVCYV NLSEAEVELP AGYRVLVASE
PVDGALLPVD VAVWLVAE
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