| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5856 |
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| Symbol | |
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| ID | 8337217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6763103 |
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| End bp | 6764455 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958960 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003116555 |
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| Protein GI | 256394991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.399636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGAT ACCGTCCCTC CTTGACGACC GCCGCTGCCG CGGTCGTAGC GGCAGCTCTT
TCCCTGACCG GCTGCTCCAG CTCCACCTCG AAGTCCGCTT CGGGGTCGGG CGCCTCGGCG
ACGTCGGCGT CCTCGCCCTC GGCGTCCGGG TCCAGCTCGG CGCCGGCCGC GGCCTCGTCC
TCCTCCAGCG CGCCGCCGGT CCGCGACCCC AACACAGACC TGGTGATCTG GACCGACGCC
CAGCGCGCCC CGGTCCTGCA GCAGTTCGCG CAGAGCTTCG CCGCCGCCAA CGGCATCTCG
GTGAGCGTCC AGCCGGTGGC CACCGACCTG CAGTCGGCGT ACGTCACCGC CACCGCCGCC
GGCAAGGGAC CGGACATCGT GGTCGGCGCC ACCGACTGGA TCGGCAACCT GGTGCAGAAC
GGCGCCATCT CGCCGCTGCC GCTGACCGCG GCGCAGAAGG GCTCCTTCCA GACCACCGCG
CTGAACGCCG TCACCTACAA CGGCCAGGTC TACGGCGTTC CCTACGCGAC CGAGAACCTC
GCGCTGATCA CCAACACCGC CGAGGCCGCG GCGAACCCGG CGACCTTCGA GACCATGGTC
GCCGACGGCC AGGCCGCGGT GAAGGCCGGC AAGGCCTCCG AGGCGTTGGC GATGCAGATC
GGCCAGCAGG GCGACCCCTA CACGGCGCAG CCGCTGCTGG GCTCGGCCGG CGGCTTCATC
TTCGGGACCA AGGCCGACGG CAGCTACGAC CCCTCGCAAG TCGGTGTCGA CAACGCCGGC
TCCAAGGCGT TCGCCGCGCA GCTGGCCAAG TACGGCGAGA AGGGCCAGAA CGTCTTCAAG
CGCAGCATCG ACGCCAACAA CGCGGTGTCG CTGTTCACCT CCGGCAAGAC CCCGTACCTC
ATCTCCGGTC CGTGGGCGCT GGACCAGATC CGCAAGGCGA ATCTGAAGTA CTCGATCAGC
GCGGTCCCCG GCTTCGCCGG CATGGGCCCG TCGCAGCCGT TCGTCGGCGT GCAGGCCTTC
TACGTCTCGG CCAAGGCCAA GAACACCGCG ATCGCGCAGG AGTTCACGCT GAACTACCTG
ACGAAGAAGG ACGTCGAGGA AGCGCTGTAC AAGGTGGACC CGCGCGCGCC CGCCCTGACC
GACGCCTACA ACGATGTGTC CAAGACCGAC CCGGACATCG CCGCCTTCCA GGCCGCGGCC
GCGCACGGCG TCGTGCTCCC GCAGATCCCC GCGATGTCCG CGGTGTGGGG TCCGCTCGGG
ATCGCCGAGG CGGCGATCGT CGGCGGCGCC GACCCGAACA CCTCGATGGC GGACGCCGCC
ACCCAGATCA AGGCCGCTAT CGCCAAGGGC TAG
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| Protein sequence | MVRYRPSLTT AAAAVVAAAL SLTGCSSSTS KSASGSGASA TSASSPSASG SSSAPAAASS
SSSAPPVRDP NTDLVIWTDA QRAPVLQQFA QSFAAANGIS VSVQPVATDL QSAYVTATAA
GKGPDIVVGA TDWIGNLVQN GAISPLPLTA AQKGSFQTTA LNAVTYNGQV YGVPYATENL
ALITNTAEAA ANPATFETMV ADGQAAVKAG KASEALAMQI GQQGDPYTAQ PLLGSAGGFI
FGTKADGSYD PSQVGVDNAG SKAFAAQLAK YGEKGQNVFK RSIDANNAVS LFTSGKTPYL
ISGPWALDQI RKANLKYSIS AVPGFAGMGP SQPFVGVQAF YVSAKAKNTA IAQEFTLNYL
TKKDVEEALY KVDPRAPALT DAYNDVSKTD PDIAAFQAAA AHGVVLPQIP AMSAVWGPLG
IAEAAIVGGA DPNTSMADAA TQIKAAIAKG
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