Gene Caci_5855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5855 
Symbol 
ID8337216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6761356 
End bp6762912 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content66% 
IMG OID644958959 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_003116554 
Protein GI256394990 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.333892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.223629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCT CGCCCTCGGA GCGTCTCGCG CGCTTGTCGT GGCCGCGGGT CGTCTTCGTC 
GGGCTGGTCG CCGCCTTCGC GGTCGTCACG ATCCCGACGC TGGTCGACAA GCACTCGTGG
ACCGGCGTGA CGATCTCCGT CGCGGTGACG GCGATCCTCG CCTACGTCTA CCTGACGCCG
AAACGGATCG CCGCCCGGTT CCTGGTCCCC GGCACGATCC TGTTGCTGGC CTTCCAGGTC
TACCCGATCG GCTACACGAT CAGCACCGCC TTCACCAACT ACGGCGACGG CCACCGGTTG
ACCAAGACCC AGGCTGTGGC GCAGATCGAG GCCGACTCCG TGATCGAGCA GCCCGGCGCG
CAGCGCTACG AGCTGTCGGT CGCGACCAAG GCCTCCGACA CCTCCGGCGC CTTCGTCTTC
TTCCTCACCG ATCCGGACGG CAAGGTCGAG CGCGGCGACG CCTCCGGGCT CGCCCCGGTA
CCGGACGCGC AGGTCACCAA AGACCAGTTC ACCGGCAAGG TGATCACCGC GCAGGGCTGG
CACATCCTGA CCGGCATCCA GGTCAACGGT CTGGGCCCGC GCCTGGCCTC GTTCGCCGTG
CCGACCGGTA CCGGCTTCAT CAAGTCGGTG GGCTTGTCCG AGGCGTACGT CGGCCACTTC
ACGATGACGT ACGACGCCTC CGCGCAGACC ATGACCGACA CCCGGACCCA CACTGTCTAT
AAGGAGTCCG GCGGTGAGTT CAAAGCCGCC GACGGCTCCG GGAAGACGCT GCCGATCGGC
TGGAAGATCG GCGTCGGGTT CAAGAACTTC ACCTCGGTGC TGACCGATGC GGCCATCCGT
GGTCCGTTCC TCAGAGTCCT GATCTGGACG ATCGCCTTCG CGATCCTGTC GGTGCTGACC
ACGTTCGGCT TGGGTCTGCT GCTGGCAGTG GTCATGGACC ATCCGCGGAT GCGCGGCCGA
AGGCTGTACA GCTCCCTGCT GTTGCTGCCG TACGCGATGC CGGCGTTCAT CTCCACGCTG
GTCTGGTCGA GCATGTACAA CAAGGACTTC GGCCTGCTGA ACAAGCTGTT CGGCACGCAC
ATCGACTGGC TCGGCAGCCC GTGGGCGGCG CGCGGCTCGG TGCTGCTGAC CAACCTGTGG
CTCGGCTTCC CCTACATGTT CCTGGTCTGC GCCGGTCTGT TGCAGGCGGT GCCGCAGGAG
CTGAAGGAGG TCGCGAAGGT CGACGGCGCC TCGCCGCTGC GGGTGTTCCG CTCGGTGACC
ATGCCCACGG TGCTGATCGG CGCGATGCCG CTGCTGATCG CCTCCTTCGG CTACAACTTC
AACAACTTCA ACGTGATCCG GCTGCTGACC GACGGCGGTC CCTACCCCTC CGGCAGCTCC
ACCGCGGGAG ACACGGACAT CCTGATCAGC TACACCTACC GGCTGGCGTT CGGCGGGCAG
GGCGCGCAGT ACGGCCTGGC CTCGGCGATC TCGTTCCTGA TCTTCGTGCT GGTCGGCCTG
ATCTCCTACA CCGGCTTCCG GCAGACCCGG CAGTTGGAGG AGGTGTACGC CCGATGA
 
Protein sequence
MTASPSERLA RLSWPRVVFV GLVAAFAVVT IPTLVDKHSW TGVTISVAVT AILAYVYLTP 
KRIAARFLVP GTILLLAFQV YPIGYTISTA FTNYGDGHRL TKTQAVAQIE ADSVIEQPGA
QRYELSVATK ASDTSGAFVF FLTDPDGKVE RGDASGLAPV PDAQVTKDQF TGKVITAQGW
HILTGIQVNG LGPRLASFAV PTGTGFIKSV GLSEAYVGHF TMTYDASAQT MTDTRTHTVY
KESGGEFKAA DGSGKTLPIG WKIGVGFKNF TSVLTDAAIR GPFLRVLIWT IAFAILSVLT
TFGLGLLLAV VMDHPRMRGR RLYSSLLLLP YAMPAFISTL VWSSMYNKDF GLLNKLFGTH
IDWLGSPWAA RGSVLLTNLW LGFPYMFLVC AGLLQAVPQE LKEVAKVDGA SPLRVFRSVT
MPTVLIGAMP LLIASFGYNF NNFNVIRLLT DGGPYPSGSS TAGDTDILIS YTYRLAFGGQ
GAQYGLASAI SFLIFVLVGL ISYTGFRQTR QLEEVYAR