| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5851 |
|---|
| Symbol | |
|---|
| ID | 8337212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6754077 |
|---|
| End bp | 6756251 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958955 |
|---|
| Product | peptidase S45 penicillin amidase |
|---|
| Protein accession | YP_003116550 |
|---|
| Protein GI | 256394986 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0954334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCTT TTCGCGATCA ACACGGCATC CCCCACGCCC GCGCGGCGTC GGTCGAAGGG
GCGTTCCGCG CCCAGGGCCA CATCGCCGCT CTGGACCGGG GGCTGCAGAT GGAGTACGTC
CGGCGGAAAG CCTTGGGGAC GTGGTCGGAG GTCGTCGGAT CGCGGGCGGT CACCGACGAC
ACGTTCTCCC GGCGGGTCGG CCTGGCGGCG GCGGCCCGCC TTTCCTATGA GGCGCTGGCG
CAGGAAACCA AGGCGGTGTT CGTCGCCTAC GCCGAGGGAG TGAACGCCGC GCTGCCGGAA
AGCCTCGCGG ACTGCGACCT GCCGGAGCCG CCGGCGGTGT GGGAGCCGTG GCACAGCGTC
GCGGTCTACC TCGGGCGGCA CGTCGGCATG GGAAGCATGG CGCACAAGCT GTTTCGGACC
GCGTTGCTCC CTGTGGCGCC CGCGGAGGTG GTATGGCGGG TGCGCGCCAA TGCCCGGGAC
GAGCTGATGG TCGTGCCGAC CGGGGCGGTG CACCGGGTGG ACACCGAGGG ACCGCCGGAG
GGGCACGGGG AGAAGGTCCG CGCGTGGCTC AACGGGCTCG CGGAGGTGGA GACCGTCGCG
GCGGCCGCGG ACCCGGCGGC GGGGAGCAAC AACTGGGTGG TCTCCGGGGC GCACACCGCC
TCCGGGCTTC CGCTACTGGC CGGGGATCCG CACCGGCCGT TCGAGACGCC GGGTCCGTAC
TGGCAGAACC ACGTGTCCTG CGAGGCCTTC GACGCGATCG GGCTGTCGTT CCCCGGCGTG
CCCGGCTTCC CGCACTTCGG GCACAACGCC CATGTGGCGT GGGGCATCAC GCACGGGATG
GCGGACGACC AGGACCTGTT CGTGGAGAAC CTGGACCGGC TGGAGGCGCG CACCGAGGTC
ATCTCGGTGC GGGACACCGA GCCGGTGCGG ATCACCGTGC ACAGCAGCCC GCGCGGCGGC
GTGGTGGTAC AGGACTCCGC CGCCAACACC GGGCTCGCGC TGCGCTGGAC CGGACTCGCC
GAGGCCGACC GCACGCTGGA CTGCCTGCTG CCGATGCTGA CGACGCGCTC GGTGGCAGAA
CTCGACGACG TGATGCGCGG CTGGGCGGTC CCGGTGGACC ACCTGATGAT GGCCGACGTG
CACGGCGCCA TCGGCTACCG GCTGCGCGGA CGCGTGCCCC ACCGCGACGA GGCGAATTCG
TGGGCCGCGG TACCGGGCTG GGAGCCGGAG TACGCCTGGC AGGGCTGGGT ACCCTTCGAC
GACATGCCGG CCGCCCGCGA CCCGCAGGAA GGACTCCTGG TCTCGGCGAA CAACAGGCCC
ACCGCCTCCA CCACACCGTA CGTCGCGCAC GACTTCGCCG GCCCTGCCCG CGCCACACGG
ATCTTGCAGC TGCTGCGCGA GGGCATCGCA GCCGGCGTCG CCCTGGACCG CACGGCGATG
GAGCGCATCC ACGGCGACGT AGCATCACTG ACCGCGCGCG ACTTCGTGGC CTCACTAGAG
CATGTGAAGT CGGCGGAGGG CAGCCGCCGC GCACAGCTCC TCGAGATCCT GCGCACCTGG
GACGGCACCA TGGGCCTGGG CTCCATCGCC GCAACGGTGT ACACCGAGGC GCGCCGCGAG
CTGCTGTCGA CCGTACCGCT GCCGGAGTCG GGCAATTCGC ACGCACAGCT GCTGACCCAC
CAGCAGCGCA CCGGCACACT GTGGCTGTCG TTCCAGGCAC TGCTGGCAGG AGCCCGCACC
GGCGACGAGA CCATCTTCGG GACGTGGTCG GACGCCGTCG GGCACGCCCT GGACCAGACA
GCGGAGCGCC TGGACAAGGA GATCGGCCCA GACATCGAGG ACTGGACCTG GGGACGCCTG
CACCAGTGCC GCTTCACCGC GCTGCTGCCC GGCATCCCCG CCATCGCAGG CCGCCCCCTG
CCCGGCGACA ACGAAACAGT CCGCGCCGCA GGACTGCACG GGATAGAGAC GACGGCGGCC
ACCTCCGGCT CGGTGGCACG GTACGTCTTC GACCTCGGCA ACTGGGAGAA CAGCGGCTGG
GTGGTCCCCG AGCAGAGCGA TGAGTGGTAC GCCGCGAAGC TGGTGCCGAT GCACTACGAC
TGGGAGGTGA TCGAGCGCGT CGGGACGCCG ATCGCGCTGG GCGCGGGGGC GGATTTGGAG
GATGCGGCGC GGTAG
|
|---|
| Protein sequence | MEAFRDQHGI PHARAASVEG AFRAQGHIAA LDRGLQMEYV RRKALGTWSE VVGSRAVTDD
TFSRRVGLAA AARLSYEALA QETKAVFVAY AEGVNAALPE SLADCDLPEP PAVWEPWHSV
AVYLGRHVGM GSMAHKLFRT ALLPVAPAEV VWRVRANARD ELMVVPTGAV HRVDTEGPPE
GHGEKVRAWL NGLAEVETVA AAADPAAGSN NWVVSGAHTA SGLPLLAGDP HRPFETPGPY
WQNHVSCEAF DAIGLSFPGV PGFPHFGHNA HVAWGITHGM ADDQDLFVEN LDRLEARTEV
ISVRDTEPVR ITVHSSPRGG VVVQDSAANT GLALRWTGLA EADRTLDCLL PMLTTRSVAE
LDDVMRGWAV PVDHLMMADV HGAIGYRLRG RVPHRDEANS WAAVPGWEPE YAWQGWVPFD
DMPAARDPQE GLLVSANNRP TASTTPYVAH DFAGPARATR ILQLLREGIA AGVALDRTAM
ERIHGDVASL TARDFVASLE HVKSAEGSRR AQLLEILRTW DGTMGLGSIA ATVYTEARRE
LLSTVPLPES GNSHAQLLTH QQRTGTLWLS FQALLAGART GDETIFGTWS DAVGHALDQT
AERLDKEIGP DIEDWTWGRL HQCRFTALLP GIPAIAGRPL PGDNETVRAA GLHGIETTAA
TSGSVARYVF DLGNWENSGW VVPEQSDEWY AAKLVPMHYD WEVIERVGTP IALGAGADLE
DAAR
|
|---|
| |